WormBase Tree Display for Gene: WBGene00021942
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WBGene00021942 | SMap | S_parent | Sequence | Y55F3BR | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | madf | ||||||
Allele (25) | |||||||
Strain | WBStrain00055564 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (14) | |||||||
Structured_description | Automated_description | Enriched in several structures, including accessory cell; germ line; germline precursor cell; head mesodermal cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and sir-2.1 based on microarray; RNA-seq; and tiling array studies. Is affected by six chemicals including rotenone; mianserin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MADF domain and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y55F3BR.5a | |||||
Y55F3BR.5b | |||||||
Y55F3BR.5c | |||||||
Corresponding_transcript | Y55F3BR.5a.1 | ||||||
Y55F3BR.5b.1 | |||||||
Y55F3BR.5c.1 | |||||||
Other_sequence | RS08439 | ||||||
Associated_feature | WBsf667659 | ||||||
WBsf667733 | |||||||
WBsf995277 | |||||||
Transcription_factor | WBTranscriptionFactor001106 | ||||||
Experimental_info | RNAi_result | WBRNAi00021042 | Inferred_automatically | RNAi_primary | |||
WBRNAi00037529 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057547 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017603 | ||||||
Expr1039652 | |||||||
Expr1160981 | |||||||
Expr2013338 | |||||||
Expr2031570 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (96) | |||||||
Interaction (24) | |||||||
Map_info | Map | IV | Position | -23.3078 | Error | 0.025833 | |
Positive | Positive_clone | Y55F3BR | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |