WormBase Tree Display for Gene: WBGene00021884
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| WBGene00021884 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54G2A.19 | |||||||
| Molecular_name | Y54G2A.19 | ||||||||
| Y54G2A.19.1 | |||||||||
| CE25461 | |||||||||
| Other_name | Y54G2A.s | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y54G2A.19 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y54G2A.19 | ||||||||
| DB_info | Database | AceView | gene | 4D658 | |||||
| WormQTL | gene | WBGene00021884 | |||||||
| WormFlux | gene | WBGene00021884 | |||||||
| NDB | locus_tag | CELE_Y54G2A.19 | |||||||
| NCBI | gene | 190280 | |||||||
| RefSeq | protein | NM_067867.3 | |||||||
| TREEFAM | TREEFAM_ID | TF352637 | |||||||
| TrEMBL | UniProtAcc | Q9N3B4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3B4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIV_pilon.g9886 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00007766 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00011804 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00019189 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in germ line; intestine; neurons; and somatic gonad precursor based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and gld-1 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including rotenone; Zidovudine; and bisphenol A based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.19 | |||||||
| Corresponding_transcript | Y54G2A.19.1 | ||||||||
| Associated_feature | WBsf651685 | ||||||||
| WBsf977066 | |||||||||
| WBsf977067 | |||||||||
| WBsf977068 | |||||||||
| WBsf981702 | |||||||||
| WBsf229846 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057449 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037496 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011666 | ||||||||
| Expr1160882 | |||||||||
| Expr2007938 | |||||||||
| Expr2026180 | |||||||||
| Drives_construct | WBCnstr00024416 | ||||||||
| Construct_product | WBCnstr00024416 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (77) | |||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -6.72293 | |||||||
| Method | Gene |
