WormBase Tree Display for Gene: WBGene00021763
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| WBGene00021763 | SMap | S_parent | Sequence | Y51F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | grif-1 | Paper_evidence | WBPaper00061474 | |||||
| Sequence_name | Y51F10.2 | ||||||||
| Molecular_name | Y51F10.2a | ||||||||
| Y51F10.2a.1 | |||||||||
| CE30032 | |||||||||
| Y51F10.2b | |||||||||
| CE49652 | |||||||||
| Y51F10.2c | |||||||||
| CE49624 | |||||||||
| Y51F10.2b.1 | |||||||||
| Y51F10.2c.1 | |||||||||
| Other_name | CELE_Y51F10.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | grif-1 | ||||||||
| DB_info | Database | AceView | gene | 1C455 | |||||
| WormQTL | gene | WBGene00021763 | |||||||
| WormFlux | gene | WBGene00021763 | |||||||
| NDB | locus_tag | CELE_Y51F10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021763|UniProtKB=Q8WTJ8 | |||||||
| family | PTHR22791 | ||||||||
| NCBI | gene | 245998 | |||||||
| RefSeq | protein | NM_001381322.1 | |||||||
| NM_001381324.1 | |||||||||
| NM_170813.7 | |||||||||
| TrEMBL | UniProtAcc | X5ML89 | |||||||
| X5MBH0 | |||||||||
| Q8WTJ8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8WTJ8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | grif-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | grif | ||||||||
| Allele (162) | |||||||||
| Strain | WBStrain00032111 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00085379 | ||||||||
| 00085380 | |||||||||
| 00085381 | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00020628 | ||||||||
| WBGene00011610 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020467 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Is an ortholog of human RNF227 (ring finger protein 227). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y51F10.2a | |||||||
| Y51F10.2b | |||||||||
| Y51F10.2c | |||||||||
| Corresponding_transcript | Y51F10.2a.1 | ||||||||
| Y51F10.2b.1 | |||||||||
| Y51F10.2c.1 | |||||||||
| Other_sequence | CSC01947_1 | ||||||||
| JI464091.1 | |||||||||
| CBC17006_1 | |||||||||
| CJC02459_1 | |||||||||
| CJC07773_1 | |||||||||
| CR00457 | |||||||||
| FD516769.1 | |||||||||
| CRC03389_1 | |||||||||
| Associated_feature | WBsf643074 | ||||||||
| WBsf656004 | |||||||||
| WBsf982779 | |||||||||
| WBsf982780 | |||||||||
| WBsf1009270 | |||||||||
| WBsf1009271 | |||||||||
| WBsf1009272 | |||||||||
| WBsf1009273 | |||||||||
| WBsf1009274 | |||||||||
| WBsf217268 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057155 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016286 | ||||||||
| Expr1039543 | |||||||||
| Expr1160599 | |||||||||
| Expr2007780 | |||||||||
| Expr2026019 | |||||||||
| Antibody | WBAntibody00003041 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (159) | |||||||||
| Map_info | Map | I | Position | -12.3887 | |||||
| Positive | Positive_clone | Y51F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00061474 | |||||||||
| WBPaper00064594 | |||||||||
| WBPaper00065394 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
