WormBase Tree Display for Gene: WBGene00021757
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| WBGene00021757 | SMap | S_parent | Sequence | Y50D7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | taco-1 | Person_evidence | WBPerson261 | |||||
| Sequence_name | Y50D7A.9 | ||||||||
| Molecular_name | Y50D7A.9 | ||||||||
| Y50D7A.9.1 | |||||||||
| CE28994 | |||||||||
| Other_name | Y50D7A.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y50D7A.9 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | taco-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | taco-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | taco | ||||||||
| Allele (146) | |||||||||
| Strain | WBStrain00051495 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090653 | ||||||||
| Contained_in_operon | CEOP3851 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in cytochrome-c oxidase deficiency disease. Is an ortholog of human TACO1 (translational activator of cytochrome c oxidase I). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070495 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24316) | ||||
| Molecular_info | Corresponding_CDS | Y50D7A.9 | |||||||
| Corresponding_transcript | Y50D7A.9.1 | ||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf224356 | ||||||||
| WBsf224357 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057094 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00023360 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024160 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020836 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023873 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024235 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020837 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025802 | ||||||||
| Expr1039540 | |||||||||
| Expr1160542 | |||||||||
| Expr2017203 | |||||||||
| Expr2035339 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Map | III | Position | -26.9037 | |||||
| Positive | Positive_clone | Y50D7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
