WormBase Tree Display for Gene: WBGene00021630
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WBGene00021630 | SMap | S_parent | Sequence | Y47D9A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y47D9A.3 | |||||||
Molecular_name | Y47D9A.3 | ||||||||
Y47D9A.3.1 | |||||||||
CE34398 | |||||||||
Other_name | CELE_Y47D9A.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | Y47D9A.3 | ||||||||
DB_info | Database | AceView | gene | 1E845 | |||||
WormQTL | gene | WBGene00021630 | |||||||
WormFlux | gene | WBGene00021630 | |||||||
NDB | locus_tag | CELE_Y47D9A.3 | |||||||
NCBI | gene | 189989 | |||||||
RefSeq | protein | NM_058945.4 | |||||||
TrEMBL | UniProtAcc | Q9N4V6 | |||||||
UniProt_GCRP | UniProtAcc | Q9N4V6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | CSP29.g23679 | Caenorhabditis becei | From_analysis | WormBase-Compara | |||||
CSP39.g4150 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold627.g6751 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold627.g6893 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Sp34_10146600 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrI_pilon.g682 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00136909 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00013700 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Enriched in head mesodermal cell; head neurons; hypodermis; and neuronal sheath cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by nine chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y47D9A.3 | |||||||
Corresponding_CDS_history | Y47D9A.3:wp102 | ||||||||
Corresponding_transcript | Y47D9A.3.1 | ||||||||
Associated_feature | WBsf983375 | ||||||||
Experimental_info | RNAi_result | WBRNAi00004623 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037179 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056793 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018141 | ||||||||
Expr1160250 | |||||||||
Expr2007618 | |||||||||
Expr2025856 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (98) | |||||||||
Map_info | Positive | Positive_clone | Y47D9A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -1.5095 | |||||||
Method | Gene |