WormBase Tree Display for Gene: WBGene00021617
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| WBGene00021617 | SMap | S_parent | Sequence | Y47D7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y47D7A.3 | |||||||
| Molecular_name | Y47D7A.3 | ||||||||
| Y47D7A.3.1 | |||||||||
| CE51639 | |||||||||
| Other_name | CELE_Y47D7A.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y47D7A.3 | ||||||||
| DB_info | Database | AceView | gene | 5E887 | |||||
| WormQTL | gene | WBGene00021617 | |||||||
| WormFlux | gene | WBGene00021617 | |||||||
| NDB | locus_tag | CELE_Y47D7A.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021617|UniProtKB=Q95XZ3 | |||||||
| family | PTHR47630 | ||||||||
| NCBI | gene | 189981 | |||||||
| RefSeq | protein | NM_001330867.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315528 | |||||||
| TrEMBL | UniProtAcc | Q95XZ3 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XZ3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| Strain | WBStrain00036890 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089454 | ||||||||
| Ortholog (30) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47D7A.3 | |||||||
| Corresponding_CDS_history | Y47D7A.3:wp253 | ||||||||
| Corresponding_transcript | Y47D7A.3.1 | ||||||||
| Associated_feature | WBsf999782 | ||||||||
| WBsf1019488 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056784 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1017924 | ||||||||
| Expr1160242 | |||||||||
| Expr2007616 | |||||||||
| Expr2025853 | |||||||||
| Drives_construct | WBCnstr00024477 | ||||||||
| Construct_product | WBCnstr00024477 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster | WBPaper00031040:TGF-beta_adult_downregulated | ||||||||
| WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray | |||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00050726:starvation_regulated_LowSalt | |||||||||
| WBPaper00061340:pm1_pm2 | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium | |||||||||
| WBPaper00041939:control_vs_UVC-EtBr-exposed_24h | |||||||||
| WBPaper00048989:eat-2(ad465)_rapamycin_upregulated | |||||||||
| SAGE_tag | SAGE:aagttttgga | Strand | Antisense | ||||||
| SAGE:gggtgcagta | Strand | Antisense | |||||||
| Map_info | Positive | Positive_clone | Y47D7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -5.60897 | |||||||
| Reference | WBPaper00064898 | ||||||||
| Method | Gene |
