WormBase Tree Display for Gene: WBGene00021587
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WBGene00021587 | SMap | S_parent | Sequence | Y46C8AR | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-76 | Person_evidence | WBPerson261 | |||||
WBPerson655 | |||||||||
Sequence_name | Y46C8AR.1 | ||||||||
Molecular_name (3) | |||||||||
Other_name | Y46C8AR.a | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y46C8AR.1 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | clec-76 | ||||||||
DB_info | Database | AceView | gene | 4E733 | |||||
WormQTL | gene | WBGene00021587 | |||||||
WormFlux | gene | WBGene00021587 | |||||||
NDB | locus_tag | CELE_Y46C8AR.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021587|UniProtKB=Q9N3V9 | |||||||
family | PTHR23062 | ||||||||
NCBI | gene | 189950 | |||||||
RefSeq | protein | NM_068048.7 | |||||||
TREEFAM | TREEFAM_ID | TF317818 | |||||||
TrEMBL | UniProtAcc | Q9N3V9 | |||||||
UniProt_GCRP | UniProtAcc | Q9N3V9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-76 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (56) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (22) | |||||||||
Paralog (43) | |||||||||
Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including Heme; tryptophan; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y46C8AR.1 | |||||||
Corresponding_CDS_history | Y46C8AR.1:wp82 | ||||||||
Corresponding_transcript | Y46C8AR.1.1 | ||||||||
Associated_feature | WBsf996128 | ||||||||
WBsf228144 | |||||||||
WBsf228145 | |||||||||
Experimental_info | RNAi_result | WBRNAi00056654 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037121 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020644 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020914 | ||||||||
Expr1160123 | |||||||||
Expr2010208 | |||||||||
Expr2028449 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (192) | |||||||||
Map_info (3) | |||||||||
Reference (2) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |