WormBase Tree Display for Gene: WBGene00021583
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WBGene00021583 | SMap | S_parent | Sequence | Y46C8AL | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-72 | Person_evidence | WBPerson261 | |||
WBPerson655 | |||||||
Sequence_name | Y46C8AL.5 | ||||||
Molecular_name | Y46C8AL.5 | ||||||
Y46C8AL.5.1 | |||||||
CE36742 | |||||||
Other_name | CELE_Y46C8AL.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | clec-72 | ||||||
DB_info | Database | AceView | gene | 4E711 | |||
WormQTL | gene | WBGene00021583 | |||||
WormFlux | gene | WBGene00021583 | |||||
NDB | locus_tag | CELE_Y46C8AL.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00021583|UniProtKB=Q9N3W5 | |||||
family | PTHR23062 | ||||||
NCBI | gene | 177152 | |||||
RefSeq | protein | NM_068041.7 | |||||
TREEFAM | TREEFAM_ID | TF317818 | |||||
TrEMBL | UniProtAcc | Q9N3W5 | |||||
UniProt_GCRP | UniProtAcc | Q9N3W5 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (85) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (20) | |||||||
Paralog (43) | |||||||
Structured_description | Automated_description | Enriched in DD neuron; PVR; RMED; head mesodermal cell; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on quantitative PCR; microarray; RNA-seq; and proteomic studies. Is affected by twenty-four chemicals including Heme; 1-methylnicotinamide; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y46C8AL.5 | |||||
Corresponding_CDS_history | Y46C8AL.5:wp124 | ||||||
Corresponding_transcript | Y46C8AL.5.1 | ||||||
Associated_feature | WBsf645895 | ||||||
WBsf228140 | |||||||
WBsf228141 | |||||||
Experimental_info | RNAi_result | WBRNAi00020642 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1012732 | ||||||
Expr1039444 | |||||||
Expr1160120 | |||||||
Expr2010204 | |||||||
Expr2028445 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (258) | |||||||
Interaction | WBInteraction000503294 | ||||||
WBInteraction000552065 | |||||||
Map_info | Map | IV | Position | -1.44182 | Error | 0.012116 | |
Positive | Positive_clone | Y46C8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |