WormBase Tree Display for Gene: WBGene00021583
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| WBGene00021583 | SMap | S_parent | Sequence | Y46C8AL | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | clec | ||||||
| Allele (85) | |||||||
| RNASeq_FPKM (74) | |||||||
| Ortholog (20) | |||||||
| Paralog (43) | |||||||
| Structured_description | Automated_description | Enriched in DD neuron; PVR; RMED; head mesodermal cell; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on quantitative PCR; microarray; RNA-seq; and proteomic studies. Is affected by twenty-four chemicals including Heme; 1-methylnicotinamide; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | Y46C8AL.5 | |||||
| Corresponding_CDS_history | Y46C8AL.5:wp124 | ||||||
| Corresponding_transcript | Y46C8AL.5.1 | ||||||
| Associated_feature | WBsf645895 | ||||||
| WBsf228140 | |||||||
| WBsf228141 | |||||||
| Experimental_info | RNAi_result | WBRNAi00020642 | Inferred_automatically | RNAi_primary | |||
| Expr_pattern | Expr1012732 | ||||||
| Expr1039444 | |||||||
| Expr1160120 | |||||||
| Expr2010204 | |||||||
| Expr2028445 | |||||||
| Microarray_results (18) | |||||||
| Expression_cluster (258) | |||||||
| Interaction | WBInteraction000503294 | ||||||
| WBInteraction000552065 | |||||||
| Map_info | Map | IV | Position | -1.44182 | Error | 0.012116 | |
| Positive | Positive_clone | Y46C8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
