WormBase Tree Display for Gene: WBGene00021580
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WBGene00021580 | SMap | S_parent | Sequence | Y46C8AL | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-174 | Person_evidence | WBPerson2531 | |||||
Sequence_name | Y46C8AL.2 | ||||||||
Molecular_name | Y46C8AL.2 | ||||||||
Y46C8AL.2.1 | |||||||||
CE40157 | |||||||||
Other_name | Y46C8AL.b | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y46C8AL.f | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y46C8AL.g | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y46C8AL.2 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | clec-174 | ||||||||
DB_info | Database | AceView | gene | 4E700 | |||||
WormQTL | gene | WBGene00021580 | |||||||
WormFlux | gene | WBGene00021580 | |||||||
NDB | locus_tag | CELE_Y46C8AL.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021580|UniProtKB=Q9N3W8 | |||||||
family | PTHR23062 | ||||||||
NCBI | gene | 189943 | |||||||
RefSeq | protein | NM_068040.4 | |||||||
TREEFAM | TREEFAM_ID | TF317818 | |||||||
TrEMBL | UniProtAcc | Q9N3W8 | |||||||
UniProt_GCRP | UniProtAcc | Q9N3W8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-174 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (43) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00094060 | ||||||||
Ortholog (21) | |||||||||
Paralog (44) | |||||||||
Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y46C8AL.2 | |||||||
Corresponding_CDS_history (2) | |||||||||
Corresponding_transcript | Y46C8AL.2.1 | ||||||||
Other_sequence | Tcir_isotig09580 | ||||||||
Experimental_info | RNAi_result | WBRNAi00092238 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020641 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027586 | ||||||||
Expr1160117 | |||||||||
Drives_construct | WBCnstr00024497 | ||||||||
Construct_product | WBCnstr00024497 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (256) | |||||||||
Interaction | WBInteraction000544080 | ||||||||
WBInteraction000571164 | |||||||||
Map_info | Map | IV | Position | -1.501 | Error | 0.01326 | |||
Positive | Positive_clone | Y46C8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00031686 | ||||||||
WBPaper00039120 | |||||||||
WBPaper00055435 | |||||||||
WBPaper00065681 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |