WormBase Tree Display for Gene: WBGene00021576
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| WBGene00021576 | SMap | S_parent | Sequence | Y46B2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-51 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y46B2A.1 | ||||||||
| Molecular_name | Y46B2A.1 | ||||||||
| Y46B2A.1.1 | |||||||||
| CE21951 | |||||||||
| Other_name | CELE_Y46B2A.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-51 | ||||||||
| DB_info | Database | AceView | gene | 2B161 | |||||
| WormQTL | gene | WBGene00021576 | |||||||
| WormFlux | gene | WBGene00021576 | |||||||
| NDB | locus_tag | CELE_Y46B2A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021576|UniProtKB=Q9N4X2 | |||||||
| family | PTHR31379 | ||||||||
| NCBI | gene | 173467 | |||||||
| RefSeq | protein | NM_061435.8 | |||||||
| TREEFAM | TREEFAM_ID | TF322489 | |||||||
| TrEMBL | UniProtAcc | Q9N4X2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4X2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-51 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (97) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog (49) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; GLR; male distal tip cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty chemicals including hydrogen sulfide; 1-methylnicotinamide; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46B2A.1 | |||||||
| Corresponding_transcript | Y46B2A.1.1 | ||||||||
| Associated_feature | WBsf986505 | ||||||||
| WBsf220792 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020633 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056640 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037118 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028196 | ||||||||
| Expr1039443 | |||||||||
| Expr1160112 | |||||||||
| Expr2011733 | |||||||||
| Expr2029972 | |||||||||
| Drives_construct | WBCnstr00024500 | ||||||||
| Construct_product | WBCnstr00024500 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (252) | |||||||||
| Map_info | Map | II | Position | -15.5904 | Error | 0.000176 | |||
| Positive | Positive_clone | Y46B2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
