WormBase Tree Display for Gene: WBGene00021572
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| WBGene00021572 | SMap | S_parent | Sequence | Y45G12C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srd-72 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y45G12C.9 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_Y45G12C.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srd-72 | ||||||||
| DB_info | Database | AceView | gene | 5D10 | |||||
| WormQTL | gene | WBGene00021572 | |||||||
| WormFlux | gene | WBGene00021572 | |||||||
| NDB | locus_tag | CELE_Y45G12C.9 | |||||||
| NCBI | gene | 189937 | |||||||
| RefSeq | protein | NM_071291.1 | |||||||
| NM_001316845.1 | |||||||||
| NR_133605.1 | |||||||||
| NR_133606.1 | |||||||||
| NM_001316844.1 | |||||||||
| TrEMBL | UniProtAcc | A0A0M7REE8 | |||||||
| G5EG08 | |||||||||
| A0A0M7REN4 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EG08 | |||||||
| RNAcentral | URSid | URS00008D2E20 | |||||||
| URS00008DD3E5 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Feb 2005 14:09:59 | WBPerson2970 | Name_change | CGC_name | srd-72 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srd | ||||||||
| Allele | WBVar01499528 | ||||||||
| WBVar01499167 | |||||||||
| WBVar01499740 | |||||||||
| WBVar01499676 | |||||||||
| WBVar01498943 | |||||||||
| WBVar01498944 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01500066 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog (68) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Serpentine type 7TM GPCR chemoreceptor Srd and 7TM GPCR, serpentine receptor class d (Srd). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45G12C.9a | |||||||
| Y45G12C.9b | |||||||||
| Y45G12C.9e | |||||||||
| Corresponding_transcript | Y45G12C.9c | ||||||||
| Y45G12C.9d | |||||||||
| Y45G12C.9a.1 | |||||||||
| Y45G12C.9b.1 | |||||||||
| Y45G12C.9e.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020630 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040421 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040420 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010673 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1160100 | ||||||||
| Microarray_results | SMD_Y45G12C.9 | ||||||||
| Expression_cluster (24) | |||||||||
| Interaction | WBInteraction000349314 | ||||||||
| WBInteraction000377469 | |||||||||
| WBInteraction000407823 | |||||||||
| Map_info | Map | V | Position | -14.8348 | |||||
| Positive | Positive_clone | Y45G12C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
