WormBase Tree Display for Gene: WBGene00021561
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| WBGene00021561 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y45G5AM.9 | |||||||
| Molecular_name (13) | |||||||||
| Other_name | Y45G5AR.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y45G5AM.9 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y45G5AM.9 | ||||||||
| DB_info | Database | AceView | gene | 5E660 | |||||
| WormQTL | gene | WBGene00021561 | |||||||
| WormFlux | gene | WBGene00021561 | |||||||
| NDB | locus_tag | CELE_Y45G5AM.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021561|UniProtKB=Q9GUI5 | |||||||
| family | PTHR16156 | ||||||||
| NCBI | gene | 178820 | |||||||
| RefSeq | protein | NM_001383294.2 | |||||||
| NM_001330838.3 | |||||||||
| NM_071762.8 | |||||||||
| NM_001047728.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF331532 | |||||||
| TrEMBL | UniProtAcc | G4SRZ6 | |||||||
| H2L0Q4 | |||||||||
| Q9GUI5 | |||||||||
| A0A168HBA5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9GUI5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (297) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002375 | ||||||||
| 00002376 | |||||||||
| 00002377 | |||||||||
| 00002378 | |||||||||
| 00125883 | |||||||||
| 00125884 | |||||||||
| 00125885 | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable clathrin binding activity. Predicted to be involved in intracellular transport. Predicted to be located in trans-Golgi network membrane. Predicted to be part of AP-1 adaptor complex. Is an ortholog of human AFTPH (aftiphilin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y45G5AM.9a | |||||||
| Y45G5AM.9b | |||||||||
| Y45G5AM.9c | |||||||||
| Y45G5AM.9d | |||||||||
| Corresponding_transcript | Y45G5AM.9a.1 | ||||||||
| Y45G5AM.9b.1 | |||||||||
| Y45G5AM.9b.2 | |||||||||
| Y45G5AM.9c.1 | |||||||||
| Y45G5AM.9d.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000603 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056639 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037117 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013039 | ||||||||
| Expr1039439 | |||||||||
| Expr1160111 | |||||||||
| Expr2007569 | |||||||||
| Expr2025805 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction | WBInteraction000361610 | ||||||||
| WBInteraction000361611 | |||||||||
| WBInteraction000534948 | |||||||||
| WBInteraction000534951 | |||||||||
| Map_info | Positive | Positive_clone | Y45G5AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -6.31509 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
