WormBase Tree Display for Gene: WBGene00021522
expand all nodes | collapse all nodes | view schema
| WBGene00021522 | SMap | S_parent | Sequence | Y41D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-274 | Person_evidence | WBPerson600 | |||||
| Sequence_name | Y41D4B.21 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_Y41D4B.21 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nhr-274 | ||||||||
| DB_info | Database | AceView | gene | 4C402 | |||||
| WormQTL | gene | WBGene00021522 | |||||||
| WormFlux | gene | WBGene00021522 | |||||||
| NDB | locus_tag | CELE_Y41D4B.21 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021522|UniProtKB=Q95Y05 | |||||||
| family | PTHR46587 | ||||||||
| NCBI | gene | 189825 | |||||||
| RefSeq | protein | NM_001380055.1 | |||||||
| NM_001380054.1 | |||||||||
| NM_067713.5 | |||||||||
| NM_001307593.4 | |||||||||
| TrEMBL | UniProtAcc | U4PC44 | |||||||
| U4PEZ8 | |||||||||
| U4PBS1 | |||||||||
| Q95Y05 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95Y05 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-274 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (231) | |||||||||
| Strain | WBStrain00037739 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089507 | ||||||||
| 00089508 | |||||||||
| 00089509 | |||||||||
| 00125851 | |||||||||
| 00125852 | |||||||||
| 00125853 | |||||||||
| 00125854 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41D4B.21a | |||||||
| Y41D4B.21b | |||||||||
| Y41D4B.21c | |||||||||
| Y41D4B.21d | |||||||||
| Corresponding_CDS_history | Y41D4B.21:wp124 | ||||||||
| Y41D4B.21:wp231 | |||||||||
| Corresponding_transcript | Y41D4B.21a.1 | ||||||||
| Y41D4B.21b.1 | |||||||||
| Y41D4B.21c.1 | |||||||||
| Y41D4B.21d.1 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf667753 | ||||||||
| WBsf716565 | |||||||||
| WBsf995498 | |||||||||
| WBsf995499 | |||||||||
| WBsf1016767 | |||||||||
| WBsf1016768 | |||||||||
| Transcription_factor | WBTranscriptionFactor000310 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00056391 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1012072 | ||||||||
| Expr1039409 | |||||||||
| Expr1159874 | |||||||||
| Expr2014164 | |||||||||
| Expr2032408 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (66) | |||||||||
| Interaction | WBInteraction000526889 | ||||||||
| Map_info | Map | IV | Position | -16.2677 | Error | 0.008974 | |||
| Positive | Positive_clone | Y41D4B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
