WormBase Tree Display for Gene: WBGene00021519
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WBGene00021519 | SMap | S_parent | Sequence | Y41D4B | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (66) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOP4641 | |||||
Ortholog | WBGene00078935 | Caenorhabditis remanei | From_analysis | OMA | ||
TreeFam | ||||||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
CBOVI.g10790 | Caenorhabditis bovis | From_analysis | WormBase-Compara | |||
CSP29.g21746 | Caenorhabditis becei | From_analysis | WormBase-Compara | |||
CSP31.g9564 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | |||
CSP38.g15562 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | |||
CSP38.g15563 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | |||
CSP39.g4397 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | |||
chrIV_pilon.g9698 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Paralog (21) | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABalppappa; ABarappppa; intestine; male distal tip cell; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including methylmercuric chloride; mianserin; and D-glucopyranose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Transmembrane glycoprotein. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y41D4B.17 | ||||
Corresponding_transcript | Y41D4B.17.1 | |||||
Associated_feature (2) | ||||||
Experimental_info | RNAi_result (4) | |||||
Expr_pattern | Expr1028084 | |||||
Expr1039408 | ||||||
Expr1159871 | ||||||
Expr2007444 | ||||||
Expr2025680 | ||||||
Microarray_results (15) | ||||||
Expression_cluster (214) | ||||||
Map_info | Positive | Positive_clone | Y41D4B | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | -17.8085 | ||||
Method | Gene |