WormBase Tree Display for Gene: WBGene00021496
expand all nodes | collapse all nodes | view schema
WBGene00021496 | SMap | S_parent | Sequence | Y40C5A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | daf-42 | Person_evidence | WBPerson360 | |||
WBPerson31239 | |||||||
Sequence_name | Y40C5A.3 | ||||||
Molecular_name (51) | |||||||
Other_name | CELE_Y40C5A.3 | Accession_evidence | NDB | BX284604 | |||
Public_name | daf-42 | ||||||
DB_info | Database | AceView | gene | 4I100 | |||
WormQTL | gene | WBGene00021496 | |||||
WormFlux | gene | WBGene00021496 | |||||
NDB | locus_tag | CELE_Y40C5A.3 | |||||
NCBI | gene | 177507 | |||||
RefSeq | protein (17) | ||||||
TREEFAM | TREEFAM_ID | TF342754 | |||||
TrEMBL | UniProtAcc (17) | ||||||
UniProt_GCRP | UniProtAcc | W6RTL3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | daf | ||||||
Allele (142) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (19) | |||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaappppa; ABalapaappa; ABalapapapa; ABalapappaa; and anterior ganglion (post) based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by four chemicals including Zidovudine; sucrose; and stearic acid based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (5) | |||||||
Experimental_info | RNAi_result | WBRNAi00020449 | Inferred_automatically | RNAi_primary | |||
WBRNAi00020450 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020451 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056325 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020447 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059962 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059961 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059963 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020446 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059964 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr16428 | ||||||
Expr1024795 | |||||||
Expr1039394 | |||||||
Expr1159813 | |||||||
Expr2007417 | |||||||
Expr2025653 | |||||||
Drives_construct | WBCnstr00043013 | ||||||
Construct_product | WBCnstr00043013 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (108) | |||||||
Map_info | Map | IV | Position | 3.32865 | |||
Positive | Positive_clone | Y40C5A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00057489 | ||||||
WBPaper00062835 | |||||||
WBPaper00065378 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |