WormBase Tree Display for Gene: WBGene00021456
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WBGene00021456 | SMap | S_parent | Sequence | Y39F10B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | rfip-2 | |||||
Sequence_name | Y39F10B.1 | ||||||
Molecular_name | Y39F10B.1a | ||||||
Y39F10B.1a.1 | |||||||
CE42596 | |||||||
Y39F10B.1b | |||||||
CE42580 | |||||||
Y39F10B.1b.1 | |||||||
Other_name | CELE_Y39F10B.1 | Accession_evidence | NDB | BX284602 | |||
Public_name | rfip-2 | ||||||
DB_info | Database | AceView | gene | 2B21 | |||
WormQTL | gene | WBGene00021456 | |||||
WormFlux | gene | WBGene00021456 | |||||
NDB | locus_tag | CELE_Y39F10B.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00021456|UniProtKB=B2FD95 | |||||
family | PTHR15746 | ||||||
NCBI | gene | 173462 | |||||
RefSeq | protein | NM_182231.7 | |||||
NM_061397.5 | |||||||
TREEFAM | TREEFAM_ID | TF317451 | |||||
TrEMBL | UniProtAcc | B2FD96 | |||||
B2FD95 | |||||||
UniProt_GCRP | UniProtAcc | B2FD95 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rfip | ||||||
Allele (192) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00005850 | ||||||
00005851 | |||||||
00125812 | |||||||
Contained_in_operon | CEOP2032 | ||||||
Ortholog (24) | |||||||
Structured_description | Automated_description | Predicted to enable small GTPase binding activity. Predicted to be involved in regulated exocytosis. Predicted to be located in intracellular membrane-bounded organelle. Is an ortholog of human RAB11FIP1 (RAB11 family interacting protein 1) and RAB11FIP5 (RAB11 family interacting protein 5). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y39F10B.1a | |||||
Y39F10B.1b | |||||||
Corresponding_CDS_history | Y39F10B.1a:wp190 | ||||||
Y39F10B.1b:wp190 | |||||||
Corresponding_transcript | Y39F10B.1a.1 | ||||||
Y39F10B.1b.1 | |||||||
Other_sequence (12) | |||||||
Associated_feature (3) | |||||||
Experimental_info | RNAi_result | WBRNAi00001991 | Inferred_automatically | RNAi_primary | |||
WBRNAi00060304 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00060307 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020413 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00060306 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056256 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00060305 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020412 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1028018 | ||||||
Expr1039373 | |||||||
Expr1159739 | |||||||
Expr2007391 | |||||||
Expr2025626 | |||||||
Microarray_results (25) | |||||||
Expression_cluster (85) | |||||||
SAGE_tag (12) | |||||||
Interaction | WBInteraction000522597 | ||||||
WBInteraction000566203 | |||||||
WBInteraction000566205 | |||||||
Map_info | Map | II | Position | -15.5914 | |||
Positive | Positive_clone | Y39F10B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00041328 | ||||||
WBPaper00064601 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |