WormBase Tree Display for Gene: WBGene00021456
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WBGene00021456 | SMap | S_parent | Sequence | Y39F10B | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | rfip | |||||
Allele (192) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00005850 | |||||
00005851 | ||||||
00125812 | ||||||
Contained_in_operon | CEOP2032 | |||||
Ortholog (24) | ||||||
Structured_description | Automated_description | Predicted to enable small GTPase binding activity. Predicted to be involved in regulated exocytosis. Predicted to be located in intracellular membrane-bounded organelle. Is an ortholog of human RAB11FIP1 (RAB11 family interacting protein 1) and RAB11FIP5 (RAB11 family interacting protein 5). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y39F10B.1a | ||||
Y39F10B.1b | ||||||
Corresponding_CDS_history | Y39F10B.1a:wp190 | |||||
Y39F10B.1b:wp190 | ||||||
Corresponding_transcript | Y39F10B.1a.1 | |||||
Y39F10B.1b.1 | ||||||
Other_sequence (12) | ||||||
Associated_feature (3) | ||||||
Experimental_info | RNAi_result | WBRNAi00001991 | Inferred_automatically | RNAi_primary | ||
WBRNAi00060304 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00060307 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00020413 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00060306 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00056256 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00060305 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00020412 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1028018 | |||||
Expr1039373 | ||||||
Expr1159739 | ||||||
Expr2007391 | ||||||
Expr2025626 | ||||||
Microarray_results (25) | ||||||
Expression_cluster (85) | ||||||
SAGE_tag (12) | ||||||
Interaction | WBInteraction000522597 | |||||
WBInteraction000566203 | ||||||
WBInteraction000566205 | ||||||
Map_info | Map | II | Position | -15.5914 | ||
Positive | Positive_clone | Y39F10B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00041328 | |||||
WBPaper00064601 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |