WormBase Tree Display for Gene: WBGene00021440
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WBGene00021440 | SMap | S_parent | Sequence | Y39A3CL | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | rexd | |||||
Allele (401) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOP3068 | |||||
Ortholog (23) | ||||||
Structured_description | Automated_description | Enriched in several structures, including I5 neuron; cholinergic neurons; germ line; germline precursor cell; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including dpy-10; hsf-1; and sir-2.1 based on microarray; RNA-seq; and proteomic studies. Is affected by eleven chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y39A3CL.1a | ||||
Y39A3CL.1b | ||||||
Corresponding_CDS_history | Y39A3CL.1:wp91 | |||||
Y39A3CL.1:wp186 | ||||||
Corresponding_transcript | Y39A3CL.1a.1 | |||||
Y39A3CL.1b.1 | ||||||
Other_sequence | CBC16033_1 | |||||
CRC12039_1 | ||||||
MHC08002_1 | ||||||
CR11674 | ||||||
GO250881.1 | ||||||
MH09677 | ||||||
Associated_feature | WBsf991399 | |||||
WBsf991400 | ||||||
WBsf1014311 | ||||||
WBsf1014312 | ||||||
WBsf224470 | ||||||
Experimental_info | RNAi_result | WBRNAi00020367 | Inferred_automatically | RNAi_primary | ||
WBRNAi00056142 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00020359 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1014249 | |||||
Expr1039365 | ||||||
Expr1159654 | ||||||
Expr2007356 | ||||||
Expr2025590 | ||||||
Microarray_results (22) | ||||||
Expression_cluster (83) | ||||||
Interaction | WBInteraction000575604 | |||||
WBInteraction000575852 | ||||||
Map_info (3) | ||||||
Reference | WBPaper00058178 | |||||
WBPaper00063563 | ||||||
WBPaper00066109 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |