WormBase Tree Display for Gene: WBGene00021311
expand all nodes | collapse all nodes | view schema
| WBGene00021311 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | thoc-5 | Person_evidence | WBPerson1521 | |||||
| Sequence_name | Y32H12A.2 | ||||||||
| Molecular_name | Y32H12A.2a | ||||||||
| Y32H12A.2a.1 | |||||||||
| CE43676 | |||||||||
| Y32H12A.2b | |||||||||
| CE43711 | |||||||||
| Y32H12A.2b.1 | |||||||||
| Other_name | CELE_Y32H12A.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | thoc-5 | ||||||||
| DB_info | Database | AceView | gene | 3G436 | |||||
| WormQTL | gene | WBGene00021311 | |||||||
| WormFlux | gene | WBGene00021311 | |||||||
| NDB | locus_tag | CELE_Y32H12A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021311|UniProtKB=C2BR94 | |||||||
| family | PTHR13375 | ||||||||
| NCBI | gene | 175735 | |||||||
| RefSeq | protein | NM_001267997.3 | |||||||
| NM_001267998.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF314812 | |||||||
| TrEMBL | UniProtAcc | H2L0N5 | |||||||
| C2BR94 | |||||||||
| UniProt_GCRP | UniProtAcc | C2BR94 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 May 2017 10:45:03 | WBPerson2970 | Name_change | CGC_name | thoc-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | thoc | ||||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006811 | ||||||||
| 00006812 | |||||||||
| 00006813 | |||||||||
| 00006814 | |||||||||
| 00006815 | |||||||||
| 00006816 | |||||||||
| 00006817 | |||||||||
| Contained_in_operon | CEOP3292 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:3459 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19074) | ||||
| Molecular_info | Corresponding_CDS | Y32H12A.2a | |||||||
| Y32H12A.2b | |||||||||
| Corresponding_CDS_history | Y32H12A.2:wp202 | ||||||||
| Corresponding_transcript | Y32H12A.2a.1 | ||||||||
| Y32H12A.2b.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf651042 | ||||||||
| WBsf666901 | |||||||||
| WBsf226663 | |||||||||
| WBsf226664 | |||||||||
| WBsf226665 | |||||||||
| WBsf226666 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr13875 | ||||||||
| Expr1019175 | |||||||||
| Expr1039290 | |||||||||
| Expr1159336 | |||||||||
| Expr2017392 | |||||||||
| Expr2035531 | |||||||||
| Drives_construct | WBCnstr00024587 | ||||||||
| Construct_product (2) | |||||||||
| Regulate_expr_cluster | WBPaper00055103:thoc-5(wy822)_downregulated | ||||||||
| WBPaper00055103:thoc-5(wy822)_upregulated | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | III | Position | -1.80654 | |||||
| Positive | Positive_clone | Y32H12A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00037145 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041069 | |||||||||
| WBPaper00041879 | |||||||||
| WBPaper00052341 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
