WormBase Tree Display for Gene: WBGene00021295
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| WBGene00021295 | SMap | S_parent | Sequence | Y25C1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y25C1A.8 | |||||||
| Molecular_name | Y25C1A.8a | ||||||||
| Y25C1A.8a.1 | |||||||||
| CE21476 | |||||||||
| Y25C1A.8b | |||||||||
| CE32241 | |||||||||
| Y25C1A.8b.1 | |||||||||
| Y25C1A.8b.2 | |||||||||
| Other_name | CELE_Y25C1A.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y25C1A.8 | ||||||||
| DB_info | Database | AceView | gene | 2D362 | |||||
| WormQTL | gene | WBGene00021295 | |||||||
| WormFlux | gene | WBGene00021295 | |||||||
| NDB | locus_tag | CELE_Y25C1A.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021295|UniProtKB=H2KYA0 | |||||||
| family | PTHR12999 | ||||||||
| NCBI | gene | 173655 | |||||||
| RefSeq | protein | NM_182188.6 | |||||||
| NM_062039.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF105996 | |||||||
| TrEMBL | UniProtAcc | H2KYA0 | |||||||
| Q8ITV3 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYA0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (112) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021491 | ||||||||
| 00021492 | |||||||||
| 00021493 | |||||||||
| 00021494 | |||||||||
| 00021495 | |||||||||
| 00125694 | |||||||||
| Contained_in_operon | CEOP2084 | ||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Predicted to enable lipopolysaccharide binding activity. Predicted to be involved in RNA processing. Predicted to be located in nucleus. Is an ortholog of human ZRANB2 (zinc finger RANBP2-type containing 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y25C1A.8a | |||||||
| Y25C1A.8b | |||||||||
| Corresponding_CDS_history | Y25C1A.8:wp86 | ||||||||
| Corresponding_transcript | Y25C1A.8a.1 | ||||||||
| Y25C1A.8b.1 | |||||||||
| Y25C1A.8b.2 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf649954 | ||||||||
| WBsf649955 | |||||||||
| WBsf987145 | |||||||||
| WBsf987146 | |||||||||
| WBsf987147 | |||||||||
| WBsf1011828 | |||||||||
| WBsf1011829 | |||||||||
| WBsf1011830 | |||||||||
| WBsf1011831 | |||||||||
| WBsf222825 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020142 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055741 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014189 | ||||||||
| Expr1039285 | |||||||||
| Expr1159260 | |||||||||
| Expr2007180 | |||||||||
| Expr2025413 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (68) | |||||||||
| Interaction | WBInteraction000162251 | ||||||||
| WBInteraction000162499 | |||||||||
| WBInteraction000162519 | |||||||||
| WBInteraction000339779 | |||||||||
| WBInteraction000339802 | |||||||||
| WBInteraction000576743 | |||||||||
| Map_info | Positive | Positive_clone | Y25C1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -8.62136 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
