WormBase Tree Display for Gene: WBGene00021294
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| WBGene00021294 | SMap | S_parent | Sequence | Y25C1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y25C1A.7 | |||||||
| Molecular_name | Y25C1A.7a | ||||||||
| Y25C1A.7a.1 | |||||||||
| CE38563 | |||||||||
| Y25C1A.7b | |||||||||
| CE21475 | |||||||||
| Y25C1A.7c | |||||||||
| CE54004 | |||||||||
| Y25C1A.7b.1 | |||||||||
| Y25C1A.7c.1 | |||||||||
| Other_name | Y25C1A.h | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y25C1A.7 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | Y25C1A.7 | ||||||||
| DB_info | Database | AceView | gene | 2D354 | |||||
| WormQTL | gene | WBGene00021294 | |||||||
| WormFlux | gene | WBGene00021294 | |||||||
| NDB | locus_tag | CELE_Y25C1A.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021294|UniProtKB=H2KY99 | |||||||
| family | PTHR12822 | ||||||||
| NCBI | gene | 173654 | |||||||
| RefSeq | protein | NM_001377743.1 | |||||||
| NM_062038.4 | |||||||||
| NM_001383807.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF313536 | |||||||
| TrEMBL | UniProtAcc | H2KY98 | |||||||
| Q2Z1N7 | |||||||||
| H2KY99 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KY99 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (263) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021485 | ||||||||
| 00021486 | |||||||||
| 00021487 | |||||||||
| 00021488 | |||||||||
| 00021489 | |||||||||
| 00021490 | |||||||||
| 00125690 | |||||||||
| 00125691 | |||||||||
| 00125692 | |||||||||
| 00125693 | |||||||||
| Contained_in_operon | CEOP2084 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to enable small GTPase binding activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in Golgi apparatus. Is an ortholog of human YIPF1 (Yip1 domain family member 1) and YIPF2 (Yip1 domain family member 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y25C1A.7a | |||||||
| Y25C1A.7b | |||||||||
| Y25C1A.7c | |||||||||
| Corresponding_CDS_history | Y25C1A.7a:wp142 | ||||||||
| Y25C1A.7c:wp274 | |||||||||
| Corresponding_transcript | Y25C1A.7a.1 | ||||||||
| Y25C1A.7b.1 | |||||||||
| Y25C1A.7c.1 | |||||||||
| Other_sequence (42) | |||||||||
| Associated_feature | WBsf649953 | ||||||||
| WBsf665417 | |||||||||
| WBsf222823 | |||||||||
| WBsf222824 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055740 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036739 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001272 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020141 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018464 | ||||||||
| Expr1039284 | |||||||||
| Expr1159259 | |||||||||
| Expr2007179 | |||||||||
| Expr2025412 | |||||||||
| Microarray_results (48) | |||||||||
| Expression_cluster (80) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Positive | Positive_clone | Y25C1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -8.62738 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
