WormBase Tree Display for Gene: WBGene00021234
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| WBGene00021234 | SMap | S_parent | Sequence | Y19D10B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-16 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y19D10B.5 | ||||||||
| Molecular_name | Y19D10B.5 | ||||||||
| Other_name | CELE_Y19D10B.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | irld-16 | ||||||||
| DB_info | Database | AceView | gene | 5C788 | |||||
| WormQTL | gene | WBGene00021234 | |||||||
| WormFlux | gene | WBGene00021234 | |||||||
| NDB | locus_tag | CELE_Y19D10B.5 | |||||||
| NCBI | gene | 189496 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-16 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | irld | ||||||||
| Allele (110) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00024408 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| Inparanoid_8 | |||||||||
| WBGene00141655 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00144988 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00152193 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00061149 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| Paralog (54) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell based on RNA-seq studies. Is affected by several genes including daf-1; daf-3; and unc-75 based on RNA-seq and microarray studies. Is affected by dibromoacetic acid; dafa#1; and adsorbable organic bromine compound based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | Y19D10B.5:wp250 | |||||||
| Corresponding_pseudogene | Y19D10B.5 | ||||||||
| Associated_feature | WBsf999494 | ||||||||
| WBsf1019287 | |||||||||
| Experimental_info | Expr_pattern | Expr1159167 | |||||||
| Microarray_results | 177127_at | ||||||||
| A_12_P104092 | |||||||||
| GPL19516_CGZ0043452 | |||||||||
| GPL21109_Y19D10B.5 | |||||||||
| GPL8304_CE_WBGene00021234_A | |||||||||
| GPL8673_Y19D10B_5P00684 | |||||||||
| GPL8673_Y19D10B_5P00951 | |||||||||
| GPL9450_Y19D10B.5 | |||||||||
| cea2.i.46367 | |||||||||
| Expression_cluster (22) | |||||||||
| Map_info | Map | V | Position | -14.8804 | |||||
| Positive | Positive_clone | Y19D10B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
