WormBase Tree Display for Gene: WBGene00021224
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WBGene00021224 | SMap | S_parent | Sequence | Y19D10A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-209 | Person_evidence | WBPerson2531 | |||
Sequence_name | Y19D10A.9 | ||||||
Molecular_name | Y19D10A.9 | ||||||
Y19D10A.9.1 | |||||||
CE17006 | |||||||
Other_name | CELE_Y19D10A.9 | Accession_evidence | NDB | BX284605 | |||
Public_name | clec-209 | ||||||
DB_info | Database | AceView | gene | 5C831 | |||
WormQTL | gene | WBGene00021224 | |||||
WormFlux | gene | WBGene00021224 | |||||
NDB | locus_tag | CELE_Y19D10A.9 | |||||
NCBI | gene | 178716 | |||||
RefSeq | protein | NM_071249.1 | |||||
TREEFAM | TREEFAM_ID | TF317818 | |||||
TrEMBL | UniProtAcc | G5EBG4 | |||||
UniProt_GCRP | UniProtAcc | G5EBG4 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele | WBVar01499528 | ||||||
WBVar01499167 | |||||||
WBVar01499537 | |||||||
WBVar01499740 | |||||||
WBVar02135861 | |||||||
WBVar02135862 | |||||||
WBVar01499496 | |||||||
WBVar01499316 | |||||||
WBVar01500066 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (28) | |||||||
Paralog (43) | |||||||
Structured_description | Automated_description | Enriched in DA neuron; DD neuron; VA neuron; intestine; and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-five chemicals including manganese chloride; D-glucose; and stavudine based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y19D10A.9 | |||||
Corresponding_transcript | Y19D10A.9.1 | ||||||
Associated_feature | WBsf231506 | ||||||
Experimental_info | RNAi_result | WBRNAi00013380 | Inferred_automatically | RNAi_primary | |||
WBRNAi00098899 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048600 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00098900 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048601 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015772 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048599 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020106 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00098898 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103281 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1159162 | ||||||
Drives_construct | WBCnstr00024615 | ||||||
Construct_product | WBCnstr00024615 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (266) | |||||||
Interaction | WBInteraction000544672 | ||||||
Map_info | Map | V | Position | -14.8597 | |||
Positive | Positive_clone | Y19D10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031002 | ||||||
WBPaper00031686 | |||||||
WBPaper00033099 | |||||||
WBPaper00039120 | |||||||
WBPaper00060797 | |||||||
WBPaper00064073 | |||||||
WBPaper00064841 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |