WormBase Tree Display for Gene: WBGene00021224

WBGene00021224 SMap: S_parent: Sequence: Y19D10A
  Identity: Version: 2
    Name: CGC_name: clec-209 Person_evidence: WBPerson2531
      Sequence_name: Y19D10A.9
      Molecular_name: Y19D10A.9
        Y19D10A.9.1
        CE17006
      Other_name: CELE_Y19D10A.9 Accession_evidence: NDB BX284605
      Public_name: clec-209
    DB_info: Database: AceView gene 5C831
        WormQTL gene WBGene00021224
        WormFlux gene WBGene00021224
        NDB locus_tag CELE_Y19D10A.9
        NCBI gene 178716
        RefSeq protein NM_071249.1
        TREEFAM TREEFAM_ID TF317818
        TrEMBL UniProtAcc G5EBG4
        UniProt_GCRP UniProtAcc G5EBG4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-209
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele: WBVar01499528
      WBVar01499167
      WBVar01499537
      WBVar01499740
      WBVar02135861
      WBVar02135862
      WBVar01499496
      WBVar01499316
      WBVar01500066
    RNASeq_FPKM (74)
    Ortholog (28)
    Paralog (43)
    Structured_description: Automated_description: Enriched in DA neuron; DD neuron; VA neuron; intestine; and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-five chemicals including manganese chloride; D-glucose; and stavudine based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y19D10A.9
    Corresponding_transcript: Y19D10A.9.1
    Associated_feature: WBsf231506
  Experimental_info: RNAi_result: WBRNAi00013380 Inferred_automatically: RNAi_primary
      WBRNAi00098899 Inferred_automatically: RNAi_primary
      WBRNAi00048600 Inferred_automatically: RNAi_primary
      WBRNAi00098900 Inferred_automatically: RNAi_primary
      WBRNAi00048601 Inferred_automatically: RNAi_primary
      WBRNAi00015772 Inferred_automatically: RNAi_primary
      WBRNAi00048599 Inferred_automatically: RNAi_primary
      WBRNAi00020106 Inferred_automatically: RNAi_primary
      WBRNAi00098898 Inferred_automatically: RNAi_primary
      WBRNAi00103281 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1159162
    Drives_construct: WBCnstr00024615
    Construct_product: WBCnstr00024615
    Microarray_results (19)
    Expression_cluster (266)
    Interaction: WBInteraction000544672
  Map_info: Map: V Position: -14.8597
    Positive: Positive_clone: Y19D10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (7)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene