WormBase Tree Display for Gene: WBGene00021208
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| WBGene00021208 | SMap | S_parent | Sequence | Y18H1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y18H1A.2 | |||||||
| Molecular_name | Y18H1A.2a | ||||||||
| Y18H1A.2a.1 | |||||||||
| CE52892 | |||||||||
| Y18H1A.2b | |||||||||
| CE52924 | |||||||||
| Y18H1A.2b.1 | |||||||||
| Y18H1A.2b.2 | |||||||||
| Other_name | CELE_Y18H1A.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y18H1A.2 | ||||||||
| DB_info | Database | AceView | gene | 1B168 | |||||
| WormQTL | gene | WBGene00021208 | |||||||
| WormFlux | gene | WBGene00021208 | |||||||
| NDB | locus_tag | CELE_Y18H1A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021208|UniProtKB=A0A3P6MY32 | |||||||
| family | PTHR22093 | ||||||||
| NCBI | gene | 171662 | |||||||
| RefSeq | protein | NM_058370.6 | |||||||
| NM_001368447.4 | |||||||||
| TrEMBL | UniProtAcc | A0A3P6N6A5 | |||||||
| A0A3P6MY32 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A3P6MY32 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1014 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplaapapa; germ line; rectal epithelial cell; rectum; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; let-60; and eat-2 based on microarray and RNA-seq studies. Is affected by eleven chemicals including rotenone; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Leukocyte receptor cluster member 1-like. Is an ortholog of human LENG1 (leukocyte receptor cluster member 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y18H1A.2a | |||||||
| Y18H1A.2b | |||||||||
| Corresponding_CDS_history | Y18H1A.2:wp268 | ||||||||
| Corresponding_transcript | Y18H1A.2a.1 | ||||||||
| Y18H1A.2b.1 | |||||||||
| Y18H1A.2b.2 | |||||||||
| Other_sequence | Hbac_isotig03916 | ||||||||
| JI464468.1 | |||||||||
| FG348857.1 | |||||||||
| Associated_feature | WBsf218928 | ||||||||
| WBsf218929 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055626 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004559 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017630 | ||||||||
| Expr1039249 | |||||||||
| Expr1159141 | |||||||||
| Expr2007136 | |||||||||
| Expr2025366 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction | WBInteraction000582170 | ||||||||
| Map_info | Positive | Positive_clone | Y18H1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -18.5812 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
