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WormBase Tree Display for Gene: WBGene00021204

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Name Class

WBGene00021204SMapS_parentSequenceY17G9B
IdentityVersion3
NameCGC_namefbxb-77Person_evidenceWBPerson655
Sequence_nameY17G9B.7
Molecular_nameY17G9B.7a
Y17G9B.7a.1
CE44188
Y17G9B.7b
CE24186
Y17G9B.7b.1
Other_nameCELE_Y17G9B.7Accession_evidenceNDBBX284604
Public_namefbxb-77
DB_infoDatabaseAceViewgene4F520
WormQTLgeneWBGene00021204
WormFluxgeneWBGene00021204
NDBlocus_tagCELE_Y17G9B.7
PanthergeneCAEEL|WormBase=WBGene00021204|UniProtKB=D0G909
familyPTHR22899
NCBIgene189469
RefSeqproteinNM_001307467.4
NM_068233.6
TrEMBLUniProtAccD0G909
U4PBN3
UniProt_GCRPUniProtAccD0G909
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
212 Dec 2005 17:22:20WBPerson2970Name_changeCGC_namefbxb-77
316 Oct 2009 09:43:15WBPerson10213EventAcquires_mergeWBGene00021203
Acquires_mergeWBGene00021203
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxb
Allele (35)
RNASeq_FPKM (74)
Ortholog (20)
Paralog (143)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalaaaarl; intestinal muscle; neurons; rectal epithelial cell; and rectum based on RNA-seq; tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on proteomic; microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY17G9B.7a
Y17G9B.7b
Corresponding_CDS_historyY17G9B.7:wp208
Corresponding_transcriptY17G9B.7a.1
Y17G9B.7b.1
Associated_featureWBsf651777
WBsf655510
WBsf667910
WBsf1017311
WBsf230011
Experimental_infoRNAi_resultWBRNAi00055601Inferred_automaticallyRNAi_primary
WBRNAi00036687Inferred_automaticallyRNAi_primary
WBRNAi00103584Inferred_automaticallyRNAi_primary
WBRNAi00020095Inferred_automaticallyRNAi_primary
Expr_patternExpr1024923
Expr1039245
Expr1159108
Expr2011678
Expr2029917
Drives_constructWBCnstr00024628
Construct_productWBCnstr00024628
Microarray_results (18)
Expression_cluster (135)
InteractionWBInteraction000540104
Map_infoMapIVPosition0.874573Error0.022652
PositivePositive_cloneY17G9BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene