WormBase Tree Display for Gene: WBGene00021204
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WBGene00021204 | SMap | S_parent | Sequence | Y17G9B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | fbxb-77 | Person_evidence | WBPerson655 | |||||
Sequence_name | Y17G9B.7 | ||||||||
Molecular_name | Y17G9B.7a | ||||||||
Y17G9B.7a.1 | |||||||||
CE44188 | |||||||||
Y17G9B.7b | |||||||||
CE24186 | |||||||||
Y17G9B.7b.1 | |||||||||
Other_name | CELE_Y17G9B.7 | Accession_evidence | NDB | BX284604 | |||||
Public_name | fbxb-77 | ||||||||
DB_info | Database | AceView | gene | 4F520 | |||||
WormQTL | gene | WBGene00021204 | |||||||
WormFlux | gene | WBGene00021204 | |||||||
NDB | locus_tag | CELE_Y17G9B.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021204|UniProtKB=D0G909 | |||||||
family | PTHR22899 | ||||||||
NCBI | gene | 189469 | |||||||
RefSeq | protein | NM_001307467.4 | |||||||
NM_068233.6 | |||||||||
TrEMBL | UniProtAcc | D0G909 | |||||||
U4PBN3 | |||||||||
UniProt_GCRP | UniProtAcc | D0G909 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-77 | ||||
3 | 16 Oct 2009 09:43:15 | WBPerson10213 | Event | Acquires_merge | WBGene00021203 | ||||
Acquires_merge | WBGene00021203 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxb | ||||||||
Allele (35) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Paralog (143) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; intestinal muscle; neurons; rectal epithelial cell; and rectum based on RNA-seq; tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on proteomic; microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y17G9B.7a | |||||||
Y17G9B.7b | |||||||||
Corresponding_CDS_history | Y17G9B.7:wp208 | ||||||||
Corresponding_transcript | Y17G9B.7a.1 | ||||||||
Y17G9B.7b.1 | |||||||||
Associated_feature | WBsf651777 | ||||||||
WBsf655510 | |||||||||
WBsf667910 | |||||||||
WBsf1017311 | |||||||||
WBsf230011 | |||||||||
Experimental_info | RNAi_result | WBRNAi00055601 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036687 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103584 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020095 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024923 | ||||||||
Expr1039245 | |||||||||
Expr1159108 | |||||||||
Expr2011678 | |||||||||
Expr2029917 | |||||||||
Drives_construct | WBCnstr00024628 | ||||||||
Construct_product | WBCnstr00024628 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (135) | |||||||||
Interaction | WBInteraction000540104 | ||||||||
Map_info | Map | IV | Position | 0.874573 | Error | 0.022652 | |||
Positive | Positive_clone | Y17G9B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |