WormBase Tree Display for Gene: WBGene00021168
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WBGene00021168 | SMap | S_parent | Sequence | Y5H2B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cyp-33C12 | |||||||
Sequence_name | Y5H2B.6 | ||||||||
Molecular_name | Y5H2B.6 | ||||||||
Y5H2B.6.1 | |||||||||
CE21315 | |||||||||
Y5H2B.6.2 | |||||||||
Other_name | Y5H2B.b | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y5H2B.6 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | cyp-33C12 | ||||||||
DB_info | Database | AceView | gene | 5C682 | |||||
WormQTL | gene | WBGene00021168 | |||||||
WormFlux | gene | WBGene00021168 | |||||||
NDB | locus_tag | CELE_Y5H2B.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021168|UniProtKB=Q9N4Q4 | |||||||
family | PTHR24300 | ||||||||
NCBI | gene | 189364 | |||||||
RefSeq | protein | NM_071198.3 | |||||||
TrEMBL | UniProtAcc | Q9N4Q4 | |||||||
UniProt_GCRP | UniProtAcc | Q9N4Q4 | |||||||
OMIM | gene | 601130 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 21 Sep 2004 09:38:16 | WBPerson1971 | Name_change | CGC_name | cyp-33C12 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cyp | ||||||||
Allele (82) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (151) | |||||||||
Paralog (44) | |||||||||
Structured_description | Automated_description | Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in organic acid metabolic process and xenobiotic metabolic process. Predicted to be located in cytoplasm and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in several diseases, including gastrointestinal system cancer (multiple); glucose metabolism disease (multiple); and lung disease (multiple). Is an ortholog of several human genes including CYP2A13 (cytochrome P450 family 2 subfamily A member 13); CYP2A6 (cytochrome P450 family 2 subfamily A member 6); and CYP2A7 (cytochrome P450 family 2 subfamily A member 7). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model (50) | ||||||||
Molecular_info | Corresponding_CDS | Y5H2B.6 | |||||||
Corresponding_transcript | Y5H2B.6.1 | ||||||||
Y5H2B.6.2 | |||||||||
Associated_feature | WBsf668794 | ||||||||
WBsf999470 | |||||||||
WBsf1019270 | |||||||||
Experimental_info | RNAi_result (12) | ||||||||
Expr_pattern | Expr1022092 | ||||||||
Expr1161232 | |||||||||
Expr2010712 | |||||||||
Expr2028951 | |||||||||
Drives_construct | WBCnstr00024652 | ||||||||
Construct_product | WBCnstr00024652 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (47) | |||||||||
Interaction (32) | |||||||||
Map_info | Map | V | Position | -15.4777 | Error | 0.012094 | |||
Positive | Positive_clone | Y5H2B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00064073 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |