WormBase Tree Display for Gene: WBGene00021117
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| WBGene00021117 | SMap | S_parent | Sequence | W09G10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-126 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | W09G10.5 | ||||||||
| Molecular_name | W09G10.5 | ||||||||
| W09G10.5.1 | |||||||||
| CE14772 | |||||||||
| Other_name | CELE_W09G10.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-126 | ||||||||
| DB_info | Database | AceView | gene | 2D811 | |||||
| WormQTL | gene | WBGene00021117 | |||||||
| WormFlux | gene | WBGene00021117 | |||||||
| NDB | locus_tag | CELE_W09G10.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021117|UniProtKB=O16641 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 173699 | |||||||
| RefSeq | protein | NM_062166.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | O16641 | |||||||
| UniProt_GCRP | UniProtAcc | O16641 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-126 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in ABaraappaa; AVK; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and sir-2.1 based on microarray; RNA-seq; and proteomic studies. Is affected by eleven chemicals including D-glucose; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W09G10.5 | |||||||
| Corresponding_transcript | W09G10.5.1 | ||||||||
| Other_sequence | CBC15963_1 | ||||||||
| Associated_feature | WBsf657424 | ||||||||
| WBsf987271 | |||||||||
| WBsf1011912 | |||||||||
| WBsf221024 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019759 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007337 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055053 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012951 | ||||||||
| Expr1039210 | |||||||||
| Expr1158591 | |||||||||
| Expr2010064 | |||||||||
| Expr2028305 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (100) | |||||||||
| Map_info | Map | II | Position | -6.24505 | Error | 0.000525 | |||
| Positive | Positive_clone | W09G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032258 | ||||||||
| WBPaper00066281 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
