WormBase Tree Display for Gene: WBGene00021082
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| WBGene00021082 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | zip-11 | Person_evidence | WBPerson260 | |||||
| WBPerson460 | |||||||||
| Sequence_name | W08E12.1 | ||||||||
| Molecular_name | W08E12.1 | ||||||||
| W08E12.1.1 | |||||||||
| CE21280 | |||||||||
| Other_name | CELE_W08E12.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | zip-11 | ||||||||
| DB_info | Database | AceView | gene | 4E77 | |||||
| WormQTL | gene | WBGene00021082 | |||||||
| WormFlux | gene | WBGene00021082 | |||||||
| NDB | locus_tag | CELE_W08E12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021082|UniProtKB=Q9N5A8 | |||||||
| family | PTHR23351 | ||||||||
| NCBI | gene | 177099 | |||||||
| RefSeq | protein | NM_067917.6 | |||||||
| SwissProt | UniProtAcc | Q9N5A8 | |||||||
| TREEFAM | TREEFAM_ID | TF315843 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5A8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Sep 2011 16:44:07 | WBPerson2970 | Name_change | CGC_name | zip-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zip | ||||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00001345 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Enables DNA-binding transcription factor binding activity. Involved in defense response to Gram-negative bacterium. Located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W08E12.1 | |||||||
| Corresponding_transcript | W08E12.1.1 | ||||||||
| Associated_feature (11) | |||||||||
| Transcription_factor | WBTranscriptionFactor000686 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036377 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00082457 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054981 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021062 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020588 | ||||||||
| Expr1039196 | |||||||||
| Expr1158514 | |||||||||
| Expr2018153 | |||||||||
| Expr2036290 | |||||||||
| Drives_construct | WBCnstr00024693 | ||||||||
| Construct_product | WBCnstr00024693 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction | WBInteraction000523811 | ||||||||
| WBInteraction000525560 | |||||||||
| WBInteraction000527650 | |||||||||
| WBInteraction000527651 | |||||||||
| WBInteraction000527652 | |||||||||
| WBInteraction000527653 | |||||||||
| WBInteraction000527654 | |||||||||
| WBInteraction000578858 | |||||||||
| WBInteraction000578859 | |||||||||
| WBInteraction000578860 | |||||||||
| Map_info | Map | IV | Position | -4.75423 | Error | 0.010463 | |||
| Positive | Positive_clone | W08E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00031111 | |||||||||
| WBPaper00062117 | |||||||||
| WBPaper00062184 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
