WormBase Tree Display for Gene: WBGene00021049
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| WBGene00021049 | SMap | S_parent | Sequence | W05H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W05H9.2 | |||||||
| Molecular_name | W05H9.2 | ||||||||
| W05H9.2.1 | |||||||||
| CE33720 | |||||||||
| Other_name | CELE_W05H9.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | W05H9.2 | ||||||||
| DB_info | Database | AceView | gene | XG889 | |||||
| WormQTL | gene | WBGene00021049 | |||||||
| WormFlux | gene | WBGene00021049 | |||||||
| NDB | locus_tag | CELE_W05H9.2 | |||||||
| NCBI | gene | 180899 | |||||||
| RefSeq | protein | NM_076648.8 | |||||||
| TREEFAM | TREEFAM_ID | TF321938 | |||||||
| TrEMBL | UniProtAcc | Q23178 | |||||||
| UniProt_GCRP | UniProtAcc | Q23178 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (58) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX164 | ||||||||
| Ortholog (14) | |||||||||
| Paralog | WBGene00021051 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in germ line; neurons; and somatic gonad precursor based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; dpy-10; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including D-glucose; stavudine; and paraquat based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W05H9.2 | |||||||
| Corresponding_CDS_history | W05H9.2:wp97 | ||||||||
| Corresponding_transcript | W05H9.2.1 | ||||||||
| Other_sequence | Oden_isotig19618 | ||||||||
| Tcir_isotig27289 | |||||||||
| FG352933.1 | |||||||||
| JI460763.1 | |||||||||
| FG348390.1 | |||||||||
| JI479032.1 | |||||||||
| Associated_feature | WBsf235820 | ||||||||
| WBsf235821 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019641 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054852 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015938 | ||||||||
| Expr1039177 | |||||||||
| Expr1158396 | |||||||||
| Expr2006814 | |||||||||
| Expr2025039 | |||||||||
| Drives_construct | WBCnstr00024708 | ||||||||
| Construct_product | WBCnstr00024708 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction | WBInteraction000273705 | ||||||||
| WBInteraction000282825 | |||||||||
| WBInteraction000310027 | |||||||||
| WBInteraction000328720 | |||||||||
| WBInteraction000346057 | |||||||||
| WBInteraction000362249 | |||||||||
| WBInteraction000450385 | |||||||||
| Map_info | Positive | Positive_clone | W05H9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -3.21902 | |||||||
| Method | Gene |
