WormBase Tree Display for Gene: WBGene00020920

WBGene00020920 SMap: S_parent: Sequence: W01C8
  Identity: Version: 2
    Name: CGC_name: set-20 Person_evidence: WBPerson1730
            WBPerson268
            WBPerson632
      Sequence_name: W01C8.4
      Molecular_name: W01C8.4
        W01C8.4.1
        CE53566
        W01C8.4.2
      Other_name: CELE_W01C8.4 Accession_evidence: NDB BX284606
      Public_name: set-20
    DB_info: Database: AceView gene XG300
        WormQTL gene WBGene00020920
        WormFlux gene WBGene00020920
        NDB locus_tag CELE_W01C8.4
        Panther gene CAEEL|WormBase=WBGene00020920|UniProtKB=H2KZL3
          family PTHR47250
        NCBI gene 180835
        RefSeq protein NM_001375039.1
        TrEMBL UniProtAcc A0A5E4LYP2
        UniProt_GCRP UniProtAcc A0A5E4LYP2
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 03 May 2007 10:33:07 WBPerson2970 Name_change: CGC_name: set-20
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: set
    Allele (93)
    Strain: WBStrain00032334
    RNASeq_FPKM (74)
    Contained_in_operon: CEOPX162
    Ortholog (35)
    Paralog (20)
    Structured_description: Concise_description: set-20 encodes, by alternative splicing, two isoforms of a SET domain-containing protein with no non-nematode orthologs, but several paralogs (SET-6, SET-13, SET-15, SET-19, SET-21, and SET-32); set-20 has no obvious function in mass RNAi assays. Paper_evidence: WBPaper00030864
          Curator_confirmed: WBPerson567
          Date_last_updated: 11 Oct 2007 00:00:00
      Automated_description: Expressed in hypodermis. Is predicted to encode a protein with the following domains: SET domain superfamily and SET domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W01C8.4
    Corresponding_CDS_history: W01C8.4:wp86
      W01C8.4b:wp272
    Corresponding_transcript: W01C8.4.1
      W01C8.4.2
    Other_sequence: MAC00592_1
    Associated_feature: WBsf670544
      WBsf1005342
      WBsf1005343
      WBsf1022991
  Experimental_info: RNAi_result: WBRNAi00036144 Inferred_automatically: RNAi_primary
      WBRNAi00091498 Inferred_automatically: RNAi_primary
      WBRNAi00113453 Inferred_automatically: RNAi_primary
      WBRNAi00070843 Inferred_automatically: RNAi_primary
      WBRNAi00019459 Inferred_automatically: RNAi_primary
      WBRNAi00054517 Inferred_automatically: RNAi_primary
      WBRNAi00070842 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14380
      Expr1021379
      Expr1039115
      Expr1158060
      Expr2015765
      Expr2033998
    Drives_construct: WBCnstr00024786
    Construct_product: WBCnstr00024786
    Microarray_results (26)
    Expression_cluster (112)
    Interaction: WBInteraction000008039
      WBInteraction000521419
  Map_info: Map: X Position: -4.39904 Error: 0.002004
    Positive: Positive_clone: W01C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030864
    WBPaper00036383
    WBPaper00038372
    WBPaper00039449
    WBPaper00045092
    WBPaper00064543
    WBPaper00065308
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene