WormBase Tree Display for Gene: WBGene00020878
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| WBGene00020878 | SMap | S_parent | Sequence | T28A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T28A11.16 | |||||||
| Molecular_name | T28A11.16 | ||||||||
| T28A11.16.1 | |||||||||
| CE14309 | |||||||||
| Other_name | CELE_T28A11.16 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T28A11.16 | ||||||||
| DB_info | Database | AceView | gene | 5D734 | |||||
| WormQTL | gene | WBGene00020878 | |||||||
| WormFlux | gene | WBGene00020878 | |||||||
| NDB | locus_tag | CELE_T28A11.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020878|UniProtKB=P91512 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 189021 | |||||||
| RefSeq | protein | NM_001383288.2 | |||||||
| TREEFAM | TREEFAM_ID | TF318149 | |||||||
| TrEMBL | UniProtAcc | P91512 | |||||||
| UniProt_GCRP | UniProtAcc | P91512 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00051245 | ||||||||
| 00051246 | |||||||||
| 00051247 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (90) | |||||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; intestine; and muscle cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including Mercuric Chloride; Rifampin; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Uncharacterised protein family UPF0376; Domain of unknown function DUF19; and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28A11.16 | |||||||
| Corresponding_transcript | T28A11.16.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00054357 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019360 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036056 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021120 | ||||||||
| Expr1157903 | |||||||||
| Expr2006587 | |||||||||
| Expr2024803 | |||||||||
| Drives_construct | WBCnstr00024818 | ||||||||
| Construct_product | WBCnstr00024818 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Positive | Positive_clone | T28A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.4302 | |||||||
| Reference | WBPaper00061876 | ||||||||
| Method | Gene |
