WormBase Tree Display for Gene: WBGene00020786
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| WBGene00020786 | SMap | S_parent | Sequence | T25B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T25B2.2 | |||||||
| Molecular_name | T25B2.2a | ||||||||
| T25B2.2a.1 | |||||||||
| CE39034 | |||||||||
| T25B2.2b | |||||||||
| CE39035 | |||||||||
| T25B2.2c | |||||||||
| CE42764 | |||||||||
| T25B2.2b.1 | |||||||||
| T25B2.2c.1 | |||||||||
| Other_name | CELE_T25B2.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T25B2.2 | ||||||||
| DB_info | Database | AceView | gene | XG789 | |||||
| WormQTL | gene | WBGene00020786 | |||||||
| WormFlux | gene | WBGene00020786 | |||||||
| NDB | locus_tag | CELE_T25B2.2 | |||||||
| NCBI | gene | 180887 | |||||||
| RefSeq | protein | NM_001038475.4 | |||||||
| NM_001381002.1 | |||||||||
| NM_001381003.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF317032 | |||||||
| TrEMBL | UniProtAcc | H2KZ74 | |||||||
| H2KZ75 | |||||||||
| B1GRL0 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ74 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (75) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Structured_description | Automated_description | Enriched in RIP; pharyngeal cell; pharyngeal-intestinal valve; and spermatheca based on single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on tiling array; RNA-seq; microarray; and proteomic studies. Is affected by seventeen chemicals including aldicarb; Ethanol; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25B2.2a | |||||||
| T25B2.2b | |||||||||
| T25B2.2c | |||||||||
| Corresponding_CDS_history | T25B2.2:wp147 | ||||||||
| Corresponding_transcript | T25B2.2a.1 | ||||||||
| T25B2.2b.1 | |||||||||
| T25B2.2c.1 | |||||||||
| Other_sequence | MI03980 | ||||||||
| MI00060 | |||||||||
| Associated_feature | WBsf1005504 | ||||||||
| WBsf1005505 | |||||||||
| WBsf1005506 | |||||||||
| WBsf1005507 | |||||||||
| WBsf1005508 | |||||||||
| WBsf1023071 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054095 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019185 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013709 | ||||||||
| Expr1157637 | |||||||||
| Expr2006478 | |||||||||
| Expr2024697 | |||||||||
| Drives_construct | WBCnstr00024889 | ||||||||
| Construct_product | WBCnstr00024889 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction | WBInteraction000402127 | ||||||||
| WBInteraction000403183 | |||||||||
| WBInteraction000411573 | |||||||||
| WBInteraction000450272 | |||||||||
| WBInteraction000457247 | |||||||||
| WBInteraction000578812 | |||||||||
| Map_info | Positive | Positive_clone | T25B2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -3.52682 | |||||||
| Reference | WBPaper00063926 | ||||||||
| Method | Gene |
