WormBase Tree Display for Gene: WBGene00020679
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| WBGene00020679 | SMap | S_parent | Sequence | T22B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ogdh-1 | Person_evidence | WBPerson1983 | |||||
| WBPerson261 | |||||||||
| Sequence_name | T22B11.5 | ||||||||
| Molecular_name | T22B11.5a | ||||||||
| T22B11.5a.1 | |||||||||
| CE28486 | |||||||||
| T22B11.5b | |||||||||
| CE48823 | |||||||||
| T22B11.5b.1 | |||||||||
| Other_name | CELE_T22B11.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ogdh-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Dec 2011 12:14:43 | WBPerson2970 | Name_change | CGC_name | ogdh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ogdh | ||||||||
| Allele (88) | |||||||||
| Strain | WBStrain00001374 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Contained_in_operon | CEOP4140 | ||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00014098 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable oxoglutarate dehydrogenase (succinyl-transferring) activity. Involved in protein folding. Located in mitochondrion. Expressed in head and tail. Human ortholog(s) of this gene implicated in oxoglutarate dehydrogenase deficiency. Is an ortholog of human OGDH (oxoglutarate dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070468 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25590) | ||||
| DOID:0081326 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8124) | ||||||
| Molecular_info | Corresponding_CDS | T22B11.5a | |||||||
| T22B11.5b | |||||||||
| Corresponding_transcript | T22B11.5a.1 | ||||||||
| T22B11.5b.1 | |||||||||
| Other_sequence (127) | |||||||||
| Associated_feature | WBsf667899 | ||||||||
| WBsf996374 | |||||||||
| WBsf1017301 | |||||||||
| WBsf229996 | |||||||||
| WBsf229997 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Chronogram475 | ||||||||
| Expr2111 | |||||||||
| Expr3611 | |||||||||
| Expr6739 | |||||||||
| Expr1026011 | |||||||||
| Expr1039006 | |||||||||
| Expr1157332 | |||||||||
| Expr2014614 | |||||||||
| Expr2032847 | |||||||||
| Drives_construct | WBCnstr00002265 | ||||||||
| Construct_product | WBCnstr00011536 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (181) | |||||||||
| Map_info | Map | IV | Position | 0.683268 | |||||
| Positive | Positive_clone | T22B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031648 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00049531 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00065625 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
