WormBase Tree Display for Gene: WBGene00020639
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| WBGene00020639 | SMap | S_parent | Sequence | T20H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-71 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T20H9.3 | ||||||||
| Molecular_name | T20H9.3 | ||||||||
| T20H9.3.1 | |||||||||
| CE51651 | |||||||||
| Other_name | CELE_T20H9.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-71 | ||||||||
| DB_info | Database | AceView | gene | 3D343 | |||||
| WormQTL | gene | WBGene00020639 | |||||||
| WormFlux | gene | WBGene00020639 | |||||||
| NDB | locus_tag | CELE_T20H9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020639|UniProtKB=O44889 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188666 | |||||||
| RefSeq | protein | NM_065125.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | O44889 | |||||||
| UniProt_GCRP | UniProtAcc | O44889 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-71 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (43) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; skn-1; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including Psoralens; Rifampin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20H9.3 | |||||||
| Corresponding_CDS_history | T20H9.3:wp253 | ||||||||
| Corresponding_transcript | T20H9.3.1 | ||||||||
| Associated_feature | WBsf991488 | ||||||||
| WBsf1014385 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053680 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018939 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035731 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006622 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018735 | ||||||||
| Expr1157232 | |||||||||
| Expr2011571 | |||||||||
| Expr2029809 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction | WBInteraction000319691 | ||||||||
| WBInteraction000327772 | |||||||||
| WBInteraction000351040 | |||||||||
| Map_info | Map | III | Position | -14.848 | Error | 0.001401 | |||
| Positive | Positive_clone | T20H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
