WormBase Tree Display for Gene: WBGene00020637
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WBGene00020637 | SMap | S_parent | Sequence | T20H9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | fbxa-7 | Person_evidence | WBPerson655 | |||
Sequence_name | T20H9.1 | ||||||
Molecular_name | T20H9.1 | ||||||
T20H9.1.1 | |||||||
CE39410 | |||||||
Other_name | CELE_T20H9.1 | Accession_evidence | NDB | BX284603 | |||
Public_name | fbxa-7 | ||||||
DB_info | Database | AceView | gene | 3D336 | |||
WormQTL | gene | WBGene00020637 | |||||
WormFlux | gene | WBGene00020637 | |||||
NDB | locus_tag | CELE_T20H9.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020637|UniProtKB=O44892 | |||||
family | PTHR23015 | ||||||
NCBI | gene | 188664 | |||||
RefSeq | protein | NM_065122.3 | |||||
TREEFAM | TREEFAM_ID | TF322006 | |||||
TrEMBL | UniProtAcc | O44892 | |||||
UniProt_GCRP | UniProtAcc | O44892 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxa | ||||||
Allele (33) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (42) | |||||||
Paralog (225) | |||||||
Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including skn-1; sir-2.1; and lin-35 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including Mercuric Chloride; allantoin; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T20H9.1 | |||||
Corresponding_CDS_history | T20H9.1:wp151 | ||||||
Corresponding_transcript | T20H9.1.1 | ||||||
Experimental_info | RNAi_result (3) | ||||||
Expr_pattern | Expr1021540 | ||||||
Expr1157230 | |||||||
Microarray_results (14) | |||||||
Expression_cluster (69) | |||||||
Interaction (26) | |||||||
Map_info | Map | III | Position | -14.859 | Error | 0.002335 | |
Positive | Positive_clone | T20H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |