WormBase Tree Display for Gene: WBGene00020625
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| WBGene00020625 | SMap | S_parent | Sequence | T20F5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mrrf-1 | Person_evidence | WBPerson261 | |||||
| WBPerson11285 | |||||||||
| Sequence_name | T20F5.3 | ||||||||
| Molecular_name | T20F5.3 | ||||||||
| T20F5.3.1 | |||||||||
| CE40717 | |||||||||
| Other_name | CELE_T20F5.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mrrf-1 | ||||||||
| DB_info | Database | AceView | gene | 1E478 | |||||
| WormQTL | gene | WBGene00020625 | |||||||
| WormFlux | gene | WBGene00020625 | |||||||
| NDB | locus_tag | CELE_T20F5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020625|UniProtKB=P91478 | |||||||
| family | PTHR20982 | ||||||||
| NCBI | gene | 171976 | |||||||
| RefSeq | protein | NM_058861.8 | |||||||
| SwissProt | UniProtAcc | P91478 | |||||||
| TREEFAM | TREEFAM_ID | TF323691 | |||||||
| UniProt_GCRP | UniProtAcc | P91478 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Jun 2011 16:50:10 | WBPerson2970 | Name_change | CGC_name | mrrf-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mrrf | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00051173 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00051143 | ||||||||
| 00051144 | |||||||||
| 00051145 | |||||||||
| 00051146 | |||||||||
| 00051147 | |||||||||
| 00051148 | |||||||||
| 00125216 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable ribosomal large subunit binding activity. Predicted to be involved in translation. Predicted to be located in mitochondrion. Is an ortholog of human MRRF (mitochondrial ribosome recycling factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20F5.3 | |||||||
| Corresponding_CDS_history | T20F5.3:wp171 | ||||||||
| Corresponding_transcript | T20F5.3.1 | ||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf649066 | ||||||||
| WBsf219209 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001033 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004236 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053641 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023443 | ||||||||
| Expr1038981 | |||||||||
| Expr1157200 | |||||||||
| Expr2013760 | |||||||||
| Expr2031995 | |||||||||
| Drives_construct | WBCnstr00025001 | ||||||||
| Construct_product | WBCnstr00025001 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | I | Position | -1.91377 | Error | 0.003401 | |||
| Positive | Positive_clone | T20F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
