WormBase Tree Display for Gene: WBGene00020563

WBGene00020563 SMap: S_parent: Sequence: T19C3
  Identity: Version: 1
    Name: Sequence_name: T19C3.5
      Molecular_name: T19C3.5
        T19C3.5.1
        CE54124
      Other_name: CELE_T19C3.5 Accession_evidence: NDB BX284603
      Public_name: T19C3.5
    DB_info: Database: AceView gene 3B242
        WormQTL gene WBGene00020563
        WormFlux gene WBGene00020563
        NDB locus_tag CELE_T19C3.5
        Panther gene CAEEL|WormBase=WBGene00020563|UniProtKB=Q10011
          family PTHR10504
        NCBI gene 188587
        RefSeq protein NM_001381695.1
        SwissProt UniProtAcc Q10011
        TREEFAM TREEFAM_ID TF315617
        UniProt_GCRP UniProtAcc Q10011
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (78)
    RNASeq_FPKM (74)
    GO_annotation: 00055881
      00125171
    Ortholog (32)
    Paralog: WBGene00007325 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00003812 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008512 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008652 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015544 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015545 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016951 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018403 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022627 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lipid binding activity. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in Crohn's disease; atherosclerosis; and severe acute respiratory syndrome. Is an ortholog of several human genes including BPI (bactericidal permeability increasing protein); LBP (lipopolysaccharide binding protein); and PLTP (phospholipid transfer protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:8778 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1095)
      DOID:2945 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1095)
      DOID:1936 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9093)
  Molecular_info: Corresponding_CDS: T19C3.5
    Corresponding_CDS_history: T19C3.5:wp275
    Corresponding_transcript: T19C3.5.1
    Other_sequence (15)
    Associated_feature: WBsf650805
      WBsf991106
      WBsf991107
      WBsf991108
      WBsf991109
      WBsf1014099
      WBsf1014100
      WBsf1014101
      WBsf1014102
      WBsf226115
  Experimental_info: RNAi_result: WBRNAi00035657 Inferred_automatically: RNAi_primary
      WBRNAi00022448 Inferred_automatically: RNAi_primary
      WBRNAi00053508 Inferred_automatically: RNAi_primary
      WBRNAi00006632 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012355
      Expr1038964
      Expr1157075
      Expr2006248
      Expr2024466
    Drives_construct: WBCnstr00025048
    Construct_product: WBCnstr00025048
    Microarray_results (19)
    Expression_cluster (116)
    Interaction: WBInteraction000328718
      WBInteraction000452521
  Map_info: Positive: Positive_clone: T19C3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -26.4808
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene