WormBase Tree Display for Gene: WBGene00020542

WBGene00020542 SMap: S_parent: Sequence: T17A3
  Identity: Version: 2
    Name: CGC_name: fbxb-82 Person_evidence: WBPerson655
      Sequence_name: T17A3.4
      Molecular_name: T17A3.4
        T17A3.4.1
        CE19582
      Other_name: CELE_T17A3.4 Accession_evidence: NDB BX284603
      Public_name: fbxb-82
    DB_info: Database: AceView gene 3A756
        WormQTL gene WBGene00020542
        WormFlux gene WBGene00020542
        NDB locus_tag CELE_T17A3.4
        Panther gene CAEEL|WormBase=WBGene00020542|UniProtKB=O76692
          family PTHR22899
        NCBI gene 188566
        RefSeq protein NM_064754.4
        TrEMBL UniProtAcc O76692
        UniProt_GCRP UniProtAcc O76692
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-82
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (64)
    RNASeq_FPKM (74)
    Ortholog (27)
    Paralog (144)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in IL socket cell; NSM; and tail precursor cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; Alovudine; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T17A3.4
    Corresponding_transcript: T17A3.4.1
    Associated_feature: WBsf650785
  Experimental_info: RNAi_result: WBRNAi00053450 Inferred_automatically: RNAi_primary
      WBRNAi00035626 Inferred_automatically: RNAi_primary
      WBRNAi00006609 Inferred_automatically: RNAi_primary
      WBRNAi00008263 Inferred_automatically: RNAi_primary
      WBRNAi00018791 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1038951
      Expr1157019
      Expr2011683
      Expr2029922
    Drives_construct: WBCnstr00025066
    Construct_product: WBCnstr00025066
    Microarray_results (17)
    Expression_cluster (96)
    Interaction (215)
  Map_info: Map: III Position: -26.9825 Error: 0.000246
    Positive: Positive_clone: T17A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene