WormBase Tree Display for Gene: WBGene00020517
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WBGene00020517 | SMap | S_parent | Sequence | T15B7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | hpo-8 | Paper_evidence | WBPaper00038231 | |||||
Person_evidence | WBPerson26 | ||||||||
Sequence_name | T15B7.2 | ||||||||
Molecular_name | T15B7.2 | ||||||||
T15B7.2.1 | |||||||||
CE33319 | |||||||||
Other_name | CELE_T15B7.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | hpo-8 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-8 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hpo | ||||||||
Allele (20) | |||||||||
Strain | WBStrain00037074 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Ortholog (40) | |||||||||
Paralog | WBGene00011205 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable 3-hydroxyacyl-CoA dehydratase activity. Predicted to be involved in fatty acid elongation; sphingolipid biosynthetic process; and very long-chain fatty acid biosynthetic process. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in congenital myopathy. Is an ortholog of human HACD2 (3-hydroxyacyl-CoA dehydratase 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0081337 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9639) | ||||
Molecular_info | Corresponding_CDS | T15B7.2 | |||||||
Corresponding_CDS_history | T15B7.2:wp93 | ||||||||
Corresponding_transcript | T15B7.2.1 | ||||||||
Other_sequence (98) | |||||||||
Associated_feature | WBsf646899 | ||||||||
WBsf646900 | |||||||||
WBsf231916 | |||||||||
Experimental_info | RNAi_result | WBRNAi00088598 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053360 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026299 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009176 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00091204 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00091205 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00091025 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088705 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053364 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011347 | ||||||||
Expr1038945 | |||||||||
Expr1156945 | |||||||||
Expr2012585 | |||||||||
Expr2030821 | |||||||||
Drives_construct | WBCnstr00025081 | ||||||||
Construct_product | WBCnstr00025081 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (125) | |||||||||
Interaction (65) | |||||||||
Map_info | Map | V | Position | 0.33102 | Error | 0.005764 | |||
Positive | Positive_clone | T15B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00040204 | |||||||||
WBPaper00041683 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |