WormBase Tree Display for Gene: WBGene00020457
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WBGene00020457 | SMap | S_parent | Sequence | T12B5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | fbxa | |||||
Allele (153) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (18) | ||||||
Paralog (225) | ||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | ||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Enriched in several structures, including ABplapaaapa; ABplppppaa; ABprapaaapa; ABprppppaa; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including bisphenol A; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T12B5.11 | ||||
Corresponding_transcript | T12B5.11.1 | |||||
Associated_feature | WBsf650831 | |||||
WBsf226166 | ||||||
WBsf226167 | ||||||
Experimental_info | RNAi_result (11) | |||||
Expr_pattern | Expr1025504 | |||||
Expr1156774 | ||||||
Expr2011568 | ||||||
Expr2029806 | ||||||
Drives_construct | WBCnstr00025123 | |||||
Construct_product | WBCnstr00025123 | |||||
Microarray_results (22) | ||||||
Expression_cluster (169) | ||||||
Interaction | WBInteraction000291995 | |||||
WBInteraction000306350 | ||||||
WBInteraction000318032 | ||||||
WBInteraction000324010 | ||||||
WBInteraction000357468 | ||||||
WBInteraction000380177 | ||||||
Map_info (3) | ||||||
Reference | WBPaper00012854 | |||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |