WormBase Tree Display for Gene: WBGene00020361
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| WBGene00020361 | SMap | S_parent | Sequence | T08E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-19 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T08E11.5 | ||||||||
| Molecular_name | T08E11.5 | ||||||||
| T08E11.5.1 | |||||||||
| CE33448 | |||||||||
| Other_name | CELE_T08E11.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-19 | ||||||||
| DB_info | Database | AceView | gene | 2C113 | |||||
| WormQTL | gene | WBGene00020361 | |||||||
| WormFlux | gene | WBGene00020361 | |||||||
| NDB | locus_tag | CELE_T08E11.5 | |||||||
| NCBI | gene | 173551 | |||||||
| RefSeq | protein | NM_061684.10 | |||||||
| TREEFAM | TREEFAM_ID | TF322489 | |||||||
| TrEMBL | UniProtAcc | O76639 | |||||||
| UniProt_GCRP | UniProtAcc | O76639 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-19 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (263) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; RMED; ciliated neurons; intestinal muscle; and rectal muscle based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including multi-walled carbon nanotube; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08E11.5 | |||||||
| Corresponding_CDS_history | T08E11.5:wp94 | ||||||||
| Corresponding_transcript | T08E11.5.1 | ||||||||
| Associated_feature | WBsf643993 | ||||||||
| WBsf657360 | |||||||||
| WBsf657361 | |||||||||
| WBsf657362 | |||||||||
| WBsf986827 | |||||||||
| WBsf220878 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035358 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018450 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052877 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052875 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017364 | ||||||||
| Expr1038870 | |||||||||
| Expr1156473 | |||||||||
| Expr2011705 | |||||||||
| Expr2029944 | |||||||||
| Drives_construct | WBCnstr00025192 | ||||||||
| Construct_product | WBCnstr00025192 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (90) | |||||||||
| Map_info | Map | II | Position | -14.3486 | Error | 0.003681 | |||
| Positive | Positive_clone | T08E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00061168 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
