WormBase Tree Display for Gene: WBGene00020360
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| WBGene00020360 | SMap | S_parent | Sequence | T08E11 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | math | ||||||
| Allele (148) | |||||||
| RNASeq_FPKM (74) | |||||||
| Ortholog | WBGene00154588 | Caenorhabditis brenneri | From_analysis | TreeFam | |||
| WBGene00143314 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||
| Csp11.Scaffold630.g19300 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||
| Csp11.Scaffold630.g19304 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||
| Paralog (83) | |||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; dopaminergic neurons; head mesodermal cell; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including D-glucopyranose; sesamin; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; Phosphorylation site; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | T08E11.4 | |||||
| Corresponding_transcript | T08E11.4.1 | ||||||
| Associated_feature | WBsf657363 | ||||||
| WBsf657364 | |||||||
| WBsf986828 | |||||||
| WBsf220879 | |||||||
| WBsf220880 | |||||||
| Experimental_info | RNAi_result (4) | ||||||
| Expr_pattern | Expr1038869 | ||||||
| Expr1156472 | |||||||
| Expr2013414 | |||||||
| Expr2031648 | |||||||
| Drives_construct | WBCnstr00025193 | ||||||
| Construct_product | WBCnstr00025193 | ||||||
| Microarray_results (18) | |||||||
| Expression_cluster (163) | |||||||
| Interaction (12) | |||||||
| Map_info | Map | II | Position | -14.3394 | Error | 0.003785 | |
| Positive | Positive_clone | T08E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00035598 | ||||||
| WBPaper00061616 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
