WormBase Tree Display for Gene: WBGene00020360
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WBGene00020360 | SMap | S_parent | Sequence | T08E11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | math-41 | Person_evidence | WBPerson655 | |||||
Sequence_name | T08E11.4 | ||||||||
Molecular_name | T08E11.4 | ||||||||
T08E11.4.1 | |||||||||
CE30168 | |||||||||
Other_name | CELE_T08E11.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | math-41 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-41 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | math | ||||||||
Allele (148) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00154588 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
WBGene00143314 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g19300 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g19304 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Paralog (83) | |||||||||
Structured_description | Automated_description | Enriched in OLL; PVD; dopaminergic neurons; head mesodermal cell; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including D-glucopyranose; sesamin; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; Phosphorylation site; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T08E11.4 | |||||||
Corresponding_transcript | T08E11.4.1 | ||||||||
Associated_feature | WBsf657363 | ||||||||
WBsf657364 | |||||||||
WBsf986828 | |||||||||
WBsf220879 | |||||||||
WBsf220880 | |||||||||
Experimental_info | RNAi_result (4) | ||||||||
Expr_pattern | Expr1038869 | ||||||||
Expr1156472 | |||||||||
Expr2013414 | |||||||||
Expr2031648 | |||||||||
Drives_construct | WBCnstr00025193 | ||||||||
Construct_product | WBCnstr00025193 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (163) | |||||||||
Interaction (12) | |||||||||
Map_info | Map | II | Position | -14.3394 | Error | 0.003785 | |||
Positive | Positive_clone | T08E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035598 | ||||||||
WBPaper00061616 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |