WormBase Tree Display for Gene: WBGene00020304
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| WBGene00020304 | SMap | S_parent | Sequence | T07D3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxa-200 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | T07D3.1 | |||||||||
| Molecular_name | T07D3.1 | |||||||||
| Other_name | CELE_T07D3.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | fbxa-200 | |||||||||
| DB_info | Database | AceView | gene | 2B195 | ||||||
| WormQTL | gene | WBGene00020304 | ||||||||
| WormFlux | gene | WBGene00020304 | ||||||||
| NDB | locus_tag | CELE_T07D3.1 | ||||||||
| NCBI | gene | 188221 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-200 | |||||
| 3 | 03 Sep 2014 17:02:11 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxa | |||||||||
| Allele (75) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00145332 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00080375 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00084134 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00085145 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| WBGene00078863 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
| Paralog (126) | ||||||||||
| Structured_description | Automated_description | Enriched in germ line based on RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on tiling array; microarray; and RNA-seq studies. Is affected by thirteen chemicals including hydrogen sulfide; D-glucose; and Alovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T07D3.1:wp112 | ||||||||
| T07D3.1:wp245 | ||||||||||
| Corresponding_pseudogene | T07D3.1 | |||||||||
| Associated_feature | WBsf643931 | |||||||||
| WBsf657296 | ||||||||||
| Experimental_info | Expr_pattern | Expr1027187 | ||||||||
| Expr1156358 | ||||||||||
| Microarray_results (15) | ||||||||||
| Expression_cluster (88) | ||||||||||
| Interaction | WBInteraction000172463 | |||||||||
| WBInteraction000208341 | ||||||||||
| WBInteraction000229900 | ||||||||||
| WBInteraction000256263 | ||||||||||
| WBInteraction000277654 | ||||||||||
| WBInteraction000308726 | ||||||||||
| WBInteraction000358797 | ||||||||||
| WBInteraction000377581 | ||||||||||
| Map_info | Map | II | Position | -15.5894 | ||||||
| Positive | Positive_clone | T07D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
