WormBase Tree Display for Gene: WBGene00020276
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| WBGene00020276 | SMap | S_parent | Sequence | T05H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05H4.15 | |||||||
| Molecular_name | T05H4.15a | ||||||||
| T05H4.15a.1 | |||||||||
| CE13297 | |||||||||
| T05H4.15b | |||||||||
| CE33308 | |||||||||
| T05H4.15c | |||||||||
| CE38542 | |||||||||
| T05H4.15b.1 | |||||||||
| T05H4.15c.1 | |||||||||
| Other_name | CELE_T05H4.15 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T05H4.15 | ||||||||
| DB_info | Database | AceView | gene | 5G920 | |||||
| WormQTL | gene | WBGene00020276 | |||||||
| WormFlux | gene | WBGene00020276 | |||||||
| NDB | locus_tag | CELE_T05H4.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020276|UniProtKB=H2L087 | |||||||
| family | PTHR31006 | ||||||||
| NCBI | gene | 179030 | |||||||
| RefSeq | protein | NM_182374.6 | |||||||
| NM_001028935.6 | |||||||||
| NM_072239.8 | |||||||||
| TREEFAM | TREEFAM_ID | TF319797 | |||||||
| TrEMBL | UniProtAcc | Q2Z1P0 | |||||||
| H2L087 | |||||||||
| H2L088 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L087 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (58) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in coelomocyte; head mesodermal cell; interfacial epithelial cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Psoralens; allantoin; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated; F-box associated domain, type 2; and F-box protein she-1-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05H4.15a | |||||||
| T05H4.15b | |||||||||
| T05H4.15c | |||||||||
| Corresponding_transcript | T05H4.15a.1 | ||||||||
| T05H4.15b.1 | |||||||||
| T05H4.15c.1 | |||||||||
| Other_sequence | CGC01018_1 | ||||||||
| CBC14140_1 | |||||||||
| Associated_feature | WBsf233804 | ||||||||
| WBsf233805 | |||||||||
| WBsf233806 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00073256 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052588 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033597 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052587 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013882 | ||||||||
| Expr1156202 | |||||||||
| Expr2005907 | |||||||||
| Expr2024123 | |||||||||
| Drives_construct | WBCnstr00025245 | ||||||||
| Construct_product | WBCnstr00025245 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (146) | |||||||||
| Map_info | Positive | Positive_clone | T05H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -0.165847 | |||||||
| Method | Gene |
