WormBase Tree Display for Gene: WBGene00020245
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| WBGene00020245 | SMap | S_parent | Sequence | T05B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxl-5 | Person_evidence | WBPerson17864 | |||||
| Sequence_name | T05B11.1 | ||||||||
| Molecular_name | T05B11.1 | ||||||||
| T05B11.1.1 | |||||||||
| CE07464 | |||||||||
| T05B11.1.2 | |||||||||
| Other_name | CELE_T05B11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxl-5 | ||||||||
| DB_info | Database | AceView | gene | 5I231 | |||||
| WormQTL | gene | WBGene00020245 | |||||||
| WormFlux | gene | WBGene00020245 | |||||||
| NDB | locus_tag | CELE_T05B11.1 | |||||||
| NCBI | gene | 179151 | |||||||
| RefSeq | protein | NM_072600.5 | |||||||
| TrEMBL | UniProtAcc | Q22212 | |||||||
| UniProt_GCRP | UniProtAcc | Q22212 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Jan 2024 23:28:21 | WBPerson51134 | Name_change | CGC_name | fbxl-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxl | ||||||||
| Allele (143) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including anterior hypodermis; enteric muscle; neurons; rectal muscle; and terminal bulb based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; eat-2; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is affected by fourteen chemicals including 1-methylnicotinamide; Rifampin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain and Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05B11.1 | |||||||
| Corresponding_transcript | T05B11.1.1 | ||||||||
| T05B11.1.2 | |||||||||
| Other_sequence | MHC12352_1 | ||||||||
| CJC04513_1 | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035175 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052460 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018197 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011008 | ||||||||
| Expr1038813 | |||||||||
| Expr1156084 | |||||||||
| Expr2005852 | |||||||||
| Expr2024069 | |||||||||
| Drives_construct | WBCnstr00025270 | ||||||||
| Construct_product | WBCnstr00025270 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction | WBInteraction000217979 | ||||||||
| WBInteraction000218051 | |||||||||
| WBInteraction000541640 | |||||||||
| WBInteraction000542521 | |||||||||
| WBInteraction000550743 | |||||||||
| WBInteraction000551091 | |||||||||
| WBInteraction000560480 | |||||||||
| Map_info | Positive | Positive_clone | T05B11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.867347 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
