WormBase Tree Display for Gene: WBGene00020221
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| WBGene00020221 | SMap | S_parent | Sequence | T05A7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05A7.3 | |||||||
| Molecular_name | T05A7.3 | ||||||||
| T05A7.3.1 | |||||||||
| CE04889 | |||||||||
| Other_name | CELE_T05A7.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T05A7.3 | ||||||||
| DB_info | Database | AceView | gene | 2E967 | |||||
| WormQTL | gene | WBGene00020221 | |||||||
| WormFlux | gene | WBGene00020221 | |||||||
| NDB | locus_tag | CELE_T05A7.3 | |||||||
| NCBI | gene | 188083 | |||||||
| RefSeq | protein | NM_062426.3 | |||||||
| TrEMBL | UniProtAcc | Q22206 | |||||||
| UniProt_GCRP | UniProtAcc | Q22206 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog (50) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; ABalaaaarl; ABalaaaarr; ABalaapaaa; and AFD based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and pmk-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including multi-walled carbon nanotube; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Spermadhesin, CUB domain superfamily and CUB domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05A7.3 | |||||||
| Corresponding_transcript | T05A7.3.1 | ||||||||
| Other_sequence | CBC07399_1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018184 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035170 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103504 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052447 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016092 | ||||||||
| Expr1038801 | |||||||||
| Expr1156069 | |||||||||
| Expr2005845 | |||||||||
| Expr2024062 | |||||||||
| Drives_construct | WBCnstr00025287 | ||||||||
| Construct_product | WBCnstr00025287 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction | WBInteraction000032221 | ||||||||
| WBInteraction000548628 | |||||||||
| Map_info | Positive | Positive_clone | T05A7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -3.66108 | |||||||
| Method | Gene |
