WormBase Tree Display for Gene: WBGene00020191
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WBGene00020191 | SMap | S_parent | Sequence | T03F1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-53 | Person_evidence | WBPerson655 | |||||
Sequence_name | T03F1.10 | ||||||||
Molecular_name | T03F1.10 | ||||||||
T03F1.10.1 | |||||||||
CE38630 | |||||||||
Other_name | CELE_T03F1.10 | Accession_evidence | NDB | BX284601 | |||||
Public_name | clec-53 | ||||||||
DB_info | Database | AceView | gene | 1E440 | |||||
WormQTL | gene | WBGene00020191 | |||||||
WormFlux | gene | WBGene00020191 | |||||||
NDB | locus_tag | CELE_T03F1.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020191|UniProtKB=P91429 | |||||||
family | PTHR22803 | ||||||||
NCBI | gene | 171967 | |||||||
RefSeq | protein | NM_058846.6 | |||||||
TrEMBL | UniProtAcc | P91429 | |||||||
UniProt_GCRP | UniProtAcc | P91429 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 29 Apr 2005 13:53:46 | WBPerson2970 | Name_change | CGC_name | clec-53 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00051025 | ||||||||
Ortholog (35) | |||||||||
Paralog (12) | |||||||||
Structured_description | Automated_description | Predicted to enable signaling receptor activity. Human ortholog(s) of this gene implicated in Alzheimer's disease; autoimmune disease (multiple); and cholangiocarcinoma. Is an ortholog of human REG1A (regenerating family member 1 alpha). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||||
DOID:9744 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||||||
DOID:4947 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||||||
DOID:12894 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||||||
Molecular_info | Corresponding_CDS | T03F1.10 | |||||||
Corresponding_CDS_history | T03F1.10:wp143 | ||||||||
T03F1.10:wp189 | |||||||||
Corresponding_transcript | T03F1.10.1 | ||||||||
Associated_feature | WBsf664082 | ||||||||
WBsf979014 | |||||||||
WBsf219195 | |||||||||
Experimental_info | RNAi_result | WBRNAi00052278 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035092 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089143 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004115 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr10627 | ||||||||
Expr1155910 | |||||||||
Expr2010186 | |||||||||
Expr2028428 | |||||||||
Drives_construct | WBCnstr00025311 | ||||||||
Construct_product | WBCnstr00025311 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (183) | |||||||||
Interaction | WBInteraction000119063 | ||||||||
WBInteraction000119064 | |||||||||
WBInteraction000122783 | |||||||||
WBInteraction000122817 | |||||||||
WBInteraction000123896 | |||||||||
WBInteraction000123897 | |||||||||
WBInteraction000124037 | |||||||||
WBInteraction000363527 | |||||||||
WBInteraction000442915 | |||||||||
WBInteraction000570656 | |||||||||
Map_info | Map | I | Position | -1.95526 | Error | 0.003013 | |||
Positive | Positive_clone | T03F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |